Vicugna pacos (alpaca): 102546109
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Entry
102546109 CDS
T08098
Symbol
WDR41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04140
Autophagy - animal
vpc05014
Amyotrophic lateral sclerosis
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102546109 (WDR41)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102546109 (WDR41)
05022 Pathways of neurodegeneration - multiple diseases
102546109 (WDR41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102546109 (WDR41)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102546109 (WDR41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR11_1st
TAF1C_beta-prop
PorZ_N_b_propeller
DUF5793
Motif
Other DBs
NCBI-GeneID:
102546109
NCBI-ProteinID:
XP_015101134
UniProt:
A0A6J0ATI2
LinkDB
All DBs
Position
3
AA seq
459 aa
AA seq
DB search
MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASA
GDDGIVVVWNAQTGEKLLELNGHTQKITAIITLPSLEACEEKNQLILTASADRTVIVWDC
DTGRQVQKVSCFQSTVKCLAVLRRLDVWLSGGNDLCMWNRKLDLLCKTSHLSDTGISALI
EIPKNCVVAAVGKELIIFRLVAPTEGSLGWDILEVKRLLDHQDNILSLVNVNDLSFVTGS
HVGELIIWDILDWTVQACERNFWDPSPQLDTQQEIKLCQKPNDVSIHHFTWDEENIFVAV
GRGLYVYNLQMKRVIACQKTAHDSSVLHVAKLPNRQLISCSEDGSVRIWELREKQQLAAE
PVPTGFFNMWGFGRVNKQASHPVKKQQENATSFSLELIGDLIGHSSSVEMFLYFEDHGLV
TCSADHLIILWKNGERESGLRSLKLFQKLEENGDLYLAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgatggctgatcggcggaggacgagaacctcagggactggccgagaaatctcct
ttacagacaataggtgaagaacaaacccagaacccctacactgaactgcttgtactgaaa
gctcatcatgacattgtacgatttctggtacagttagatgactacagatttgcatctgct
ggtgatgatggaattgtagttgtgtggaatgcccagacaggagaaaaacttctggaactc
aatggacacactcaaaagataacagctattattacgcttccttctttggaagcttgtgaa
gaaaaaaatcagctgatcttgacagcctctgctgatagaacagttattgtatgggattgt
gatactggcagacaagttcagaaagtatcatgcttccagtctactgtaaagtgtttagct
gttcttcggagactagatgtttggctctctggtgggaatgacctgtgtatgtggaaccga
aaattagatctcctgtgtaagaccagtcacctttctgatacagggatcagtgctttgatt
gaaatacctaagaactgtgttgtggcagcagttggcaaagaactgataattttcaggttg
gtagcacccaccgagggatcactaggatgggatattcttgaagttaagcgcctccttgat
caccaggataatattctttcactggttaatgtcaacgatttgagtttcgtaactggctcc
catgttggagagttgatcatctgggatatcctggactggactgtgcaggcctgtgaacgc
aacttctgggacccatctccacagctggacactcagcaagaaataaaactctgtcaaaaa
ccaaatgacgtttccattcatcatttcacatgggatgaagagaatatatttgttgcagtt
ggaaggggtttgtacgtgtataaccttcaaatgaagcgtgtgattgcctgccagaaaacc
gcacatgactccagtgtcttgcatgttgccaaacttccaaacaggcagttaatctcatgc
tcagaagatggcagtgtacgcatttgggagttacgagaaaaacagcagcttgcggctgaa
cctgtaccaacaggtttttttaacatgtggggatttggaagagtaaataaacaagccagc
caccctgttaaaaagcaacaagagaatgccacttcgttctcattggagcttattggagat
ttgattggacactcgtcatctgtggagatgtttctgtactttgaagatcatggactagtg
acatgctctgcagatcatctcattattttgtggaaaaatggagaacgtgaatctggactg
cgcagtttaaagttatttcaaaaattagaggagaatggtgacttatatcttgctgtctag
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