Vicugna pacos (alpaca): 107035097
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Entry
107035097 CDS
T08098
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03082
ATP-dependent chromatin remodeling
vpc04714
Thermogenesis
vpc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107035097 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
107035097 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
107035097 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
107035097 (SMARCA2)
03036 Chromosome and associated proteins [BR:
vpc03036
]
107035097 (SMARCA2)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107035097 (SMARCA2)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107035097 (SMARCA2)
Chromatin remodeling factors
BAF complex
107035097 (SMARCA2)
PBAF complex
107035097 (SMARCA2)
GBAF(ncBAF) complex
107035097 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
107035097
NCBI-ProteinID:
XP_031532785
UniProt:
A0A6J3AEE8
LinkDB
All DBs
Position
4
AA seq
1191 aa
AA seq
DB search
MRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHA
KDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLID
QKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRKKKKAEENAEGGESALGP
DGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESD
SDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQ
SYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQT
IALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLR
SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL
TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH
KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK
GGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRIL
PKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQY
FIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS
VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETL
NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEE
EEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKE
DVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNAEKVPSNSQLEIEGNSS
GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQ
TFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKI
KLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgggacacgaccctggagaccgcgctcaactccaaagcctacaagcggagcaag
cgccagaccctgagggaagcccgcatgacggagaagctggagaagcagcagaagatcgag
caggagaggaagcggcggcagaagcaccaggaatacctgaacagtattttgcagcatgca
aaagattttaaggagtaccatcggtccgtggccgggaagatccagaagctttccaaagcg
gtggcaacttggcatgccaacactgagagggagcagaagaaagagacagagcggattgaa
aaggagagaatgcgaagactgatggcagaagatgaagagggctatagaaagctgattgat
caaaagaaagacaggcgtttagcttacctcctgcagcagactgatgagtatgtggccaac
ctgaccaacctggtttgggagcacaagcaagcccaagcagccaaagagaagaagaagagg
agaaggaagaagaagaaggctgaagagaatgcggagggaggagagtccgccctgggacca
gatggagagccgatagatgagagcagtcagatgagcgacctgcctgtcaaagtgactcac
acagaaaccggcaaggtcctgtttggcccagaagcacccaaagcaagtcagctggacgcc
tggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaggagagtgac
tctgactatgaggaggaggatgaggaggaagagtctagtaggcaggaaactgaagagaaa
atactcctggatccaaacagtgaagaggtttctgagaaggacgccaagcagatcattgag
acggctaaacaggacgtggacgacgagtacagcatgcagtacagcgccaggggctcccag
tcctactacacagtggcgcacgccatctcggagagggtggagaagcagtccgccctcctc
attaacgggaccctgaagcattaccagctccagggcctggaatggatggtttctctgtat
aataacaatctgaacgggatcttagctgatgaaatggggctgggaaagaccattcagacc
atcgcactcatcacttacctgatggagcacaaaagactcaacggcccctatctcatcatt
gtgcccctttcgactctatctaactggacatatgaatttgacaaatgggctccttctgtg
gtgaaaatttcttacaagggcacccctgccatgcgtcgctctctcgtcccccagctccgg
agtggcaaattcaacgtcctcctgactacttatgagtacattataaaagacaagcacatc
cttgcaaagattcggtggaaatacatgatcgtggacgaaggccaccgaatgaagaatcac
cactgcaagctgactcaggtcttgaacactcactatgtggcccccagaaggatcctcttg
accgggaccccgctgcagaataagctcccagaactctgggccctcctcaacttcctcctc
cccacaatttttaagagctgcagcacttttgaacagtggtttaacgctccgtttgccatg
actggagagagggtggacttaaatgaagaagaaactatattgatcatcagacgtctgcat
aaggtgttgagaccatttttactgaggagactgaagaaagaagtggaatcccagcttcca
gaaaaagttgaatatgtgatcaagtgtgacatgtcagctctgcagaagattttgtatcgt
cacatgcaagccaaagggatcctcctcacagatggttctgagaaagataagaaggggaaa
ggaggtgctaagacactgatgaacactatcatgcagttgagaaaaatctgcaatcaccca
tatatgtttcagcacattgaggaatcctttgctgaacacctgggctattcaaatggggtc
atcaatggggccgagctgtatcgggcctcaggaaagtttgagctacttgatcgtattctg
ccaaaactgagagcgactaatcaccgcgtgctgcttttctgccagatgacgtctctcatg
accatcatggaggattactttgcttttcgaaacttcctttacctgcgccttgatggcacc
accaagtctgaagatcgggctgctttgctgaagaaattcaacgaacctgggtcccagtac
ttcattttcttgctgagcaccagagccggcggcctgggcttaaacctgcaggccgctgat
accgtggtcatctttgacagcgactggaatcctcatcaggacctgcaggcccaggaccgc
gctcaccgcatcggccagcagaacgaggtccgagtgctgagactctgcaccgtgaacagt
gtggaggagaagatcctcgcagccgcaaagtacaagctgaacgtggatcagaaagtgatc
caggcgggcatgtttgatcagaagtcttcgagccacgagcggagggcattcctgcaggcc
atcctggagcacgaggaggaaaacgaggaagaagatgaagtaccagacgatgagactctg
aaccaaatgattgcccgacgagaggaggaatttgatctttttatgcgtatggacatggac
cggcggagggaggatgcccggaatccgaaacgcaagcctcgcttgatggaggaagatgag
ctgccctcctggattattaaagatgacgcggaggtagagaggctgacgtgtgaagaagag
gaggagaaaattttcggtaggggttctcgccagcgccgggacgtggactacagcgacgcc
ctcacagagaagcagtggctgagggccatcgaagacggcaatttggaagaaatggaagag
gaagtacggcttaagaagcgaaaaagacgaagaaatgtggacaaagaccctgcaaaagaa
gatgtggaaaaggctaagaagaggagaggccgccctccagctgagaagctatcaccaaac
ccccccaaactgaccaagcagatgaacgccatcatcgatactgtgataaactacaaagac
aggtgtaacgcggagaaggtgcccagtaattctcagttggaaatagaaggaaacagttca
gggcgacagctcagcgaagtcttcattcagttaccttcaagaaaagaattaccagaatac
tatgaattaattaggaaaccagtggatttcaaaaaaataaaggaaaggattcgtaatcat
aagtaccggagcctgggtgacctggagaaagacgtcatgctgctctgtcacaacgctcag
accttcaacttggagggctcccagatctacgaagactccattgtcttacagtcagtgttt
aagagcgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagcaatgaagag
gaggaggaggaagatgaagaggagtcggagtcagaggcaaaatctgttaaagtgaaaatc
aagcttaataaaaaagacgagaaaggacgggacaaaggaaaaggcaagaaaaggccaaat
cgaggaaaagccaagcccgtagtgagcgacttcgacagcgacgaggagcaggatgagaac
gaacagtcagaagccagcgggaccgacgatgagtga
DBGET
integrated database retrieval system
