Vicugna pacos (alpaca): 116277104
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Entry
116277104 CDS
T08098
Name
(RefSeq) protocadherin beta-13-like
KO
K16494
protocadherin beta
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
116277104
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Protocadherins
116277104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
116277104
NCBI-ProteinID:
XP_031526879
UniProt:
A0A6J2ZZL9
LinkDB
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Position
3
AA seq
656 aa
AA seq
DB search
MESSRKLICRQRQVLFFFLFLGLAQAGSEPRRYSVVEETEGSSLVTNLAKDLGLGHGELS
RRGARVIFKGNKLHLQLDQETGDLLLNEKLDREELCGHTEPCVLRFQVLLENPLEFFQAE
LQVIDINDHAPVFIDRDMLLKIPESTSPGTIFPLKNAQDVDVGRNNIENYIISPNSYFRV
ITRKRSDGKKYPELVLDKVLDREEEPDLRLTLTAQDGGSPPRSGTAQIYIEVVDINDNAP
EFEQPFYRVQIPEDSPVGFLIANVSATDVDMGVNGEISYSLFQASEEISKTFEISPMTGE
IRLKKQLDFETTQSYEVNIEARDTGSLSGKCTVLIQVMDVNDNAPEVTMSALTRQIPENR
PETVVAVFSVSDLDSEENGKIRCSIQDDLPFFLKSSRKYPELVLDKELDREEEQEISLTL
TALDGGSPPRYGTVQVHIEVVDSNDNAPEFEQSLYKVHIPENSPVGSLVVTVSASDVDSG
VYGKISYTFFQPSEDTSKTLEVNPMTGEIRLRKQVDFETVLSYEVDIKATDGGGLSGKCT
LLLQIVDVNDNPPEVTISALTSPIPENSPEIMVAVFSVSDPDSGDNGKTISSIQDDLPFL
LKPSVKNFYSLVTRRALDREERAEYNITITVTDMGTPRLKTQHNITVLVSDVNDNA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagcaggaagctcatttgcagacaaaggcaagtcctttttttctttcttttc
ttgggcttggctcaggcgggctctgaacctaggcgctattctgtggtggaggaaactgag
gggagctctttagtaaccaatttagcaaaggacctgggtctggggcatggggaactctcc
aggaggggagctagagtcattttcaaaggaaataaactgcatttacagctcgatcaggag
actggggatttactgctaaatgagaaactggaccgggaggaactgtgtggtcacacagag
ccctgtgtgctgcgtttccaggtgttgctagagaatcccttagagttttttcaagctgag
ttacaagtaatagacataaatgaccatgccccagtgttcatagacagagatatgttgcta
aaaataccagagagcacttctcctggaactatctttcctctgaagaacgctcaggatgtg
gatgtaggccgaaataatattgaaaactatataatcagtcctaactcctattttcgggtc
atcacccgaaaacgcagtgatggcaagaaatatcccgaacttgtgctggacaaagtgcta
gatcgtgaagaggaacctgatctcaggttaaccctcactgctcaggatggcggctctcca
cccaggtctggcaccgctcagatttacatcgaagtcgtggatatcaacgataacgcccct
gaatttgagcagcctttctatagggtgcagatccctgaggacagtccagtaggcttcctg
attgccaacgtctctgctacggatgtagacatgggagtcaatggagagatttcctattca
cttttccaggcttcagaagagattagcaaaacctttgaaatcagccccatgacaggagaa
attcgactgaaaaaacaacttgattttgaaacaactcagtcctatgaggtcaatatcgag
gccagagatactggaagtctttctggaaaatgtactgttctgattcaagtcatggatgtg
aacgacaatgcccctgaagtcaccatgtctgcacttaccagacagatccctgaaaaccgg
cccgagacggtggttgcagttttcagtgtttcagatcttgattcggaagagaatgggaaa
atacgttgctccattcaggacgatctaccttttttcttgaaatcctccagaaaataccct
gagctggtactggacaaagagctggatcgggaggaggagcaagaaatctcattaacccta
acagcattggatggcggctctccgcctcggtatgggactgtccaggtgcacattgaagtg
gttgacagcaacgataatgcccccgagtttgagcagtcgctctacaaggtgcatattcct
gagaacagccctgtgggttcactggttgtcactgtctctgccagcgatgtagacagtgga
gtctacgggaaaatatcatatacattctttcagccttcagaagatactagtaaaactttg
gaggtaaaccctatgacaggcgaaattcgactaagaaaacaagtagattttgaaacagtt
ctgtcttatgaagtggacatcaaggctactgatgggggaggtctttcaggaaaatgcact
cttctcctgcagatagtggatgtgaatgataatcccccagaagtgacaatctctgcactc
accagccccatccctgagaactcgcctgagattatggttgcagttttcagtgtttcagat
cctgactccggggacaatgggaaaactatttcctccatccaggacgaccttccttttctt
ctaaaaccttcagtcaagaacttttactccttggtaaccaggagagcactagatagagaa
gaaagggccgagtacaacatcaccatcactgtcacagacatggggactcccagactgaaa
acccagcacaacataacggtgctggtgtccgacgtcaacgacaacgcc
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