KEGG   Vicugna pacos (alpaca): 116277104
Entry
116277104         CDS       T08098                                 
Name
(RefSeq) protocadherin beta-13-like
  KO
K16494  protocadherin beta
Organism
vpc  Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:vpc04515]
    116277104
Cell adhesion molecules [BR:vpc04515]
 Cadherins
  Protocadherins
   116277104
SSDB
Motif
Pfam: Cadherin Cadherin_2 VWA_3_C
Other DBs
NCBI-GeneID: 116277104
NCBI-ProteinID: XP_031526879
UniProt: A0A6J2ZZL9
LinkDB
Position
3
AA seq 656 aa
MESSRKLICRQRQVLFFFLFLGLAQAGSEPRRYSVVEETEGSSLVTNLAKDLGLGHGELS
RRGARVIFKGNKLHLQLDQETGDLLLNEKLDREELCGHTEPCVLRFQVLLENPLEFFQAE
LQVIDINDHAPVFIDRDMLLKIPESTSPGTIFPLKNAQDVDVGRNNIENYIISPNSYFRV
ITRKRSDGKKYPELVLDKVLDREEEPDLRLTLTAQDGGSPPRSGTAQIYIEVVDINDNAP
EFEQPFYRVQIPEDSPVGFLIANVSATDVDMGVNGEISYSLFQASEEISKTFEISPMTGE
IRLKKQLDFETTQSYEVNIEARDTGSLSGKCTVLIQVMDVNDNAPEVTMSALTRQIPENR
PETVVAVFSVSDLDSEENGKIRCSIQDDLPFFLKSSRKYPELVLDKELDREEEQEISLTL
TALDGGSPPRYGTVQVHIEVVDSNDNAPEFEQSLYKVHIPENSPVGSLVVTVSASDVDSG
VYGKISYTFFQPSEDTSKTLEVNPMTGEIRLRKQVDFETVLSYEVDIKATDGGGLSGKCT
LLLQIVDVNDNPPEVTISALTSPIPENSPEIMVAVFSVSDPDSGDNGKTISSIQDDLPFL
LKPSVKNFYSLVTRRALDREERAEYNITITVTDMGTPRLKTQHNITVLVSDVNDNA
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggagtccagcaggaagctcatttgcagacaaaggcaagtcctttttttctttcttttc
ttgggcttggctcaggcgggctctgaacctaggcgctattctgtggtggaggaaactgag
gggagctctttagtaaccaatttagcaaaggacctgggtctggggcatggggaactctcc
aggaggggagctagagtcattttcaaaggaaataaactgcatttacagctcgatcaggag
actggggatttactgctaaatgagaaactggaccgggaggaactgtgtggtcacacagag
ccctgtgtgctgcgtttccaggtgttgctagagaatcccttagagttttttcaagctgag
ttacaagtaatagacataaatgaccatgccccagtgttcatagacagagatatgttgcta
aaaataccagagagcacttctcctggaactatctttcctctgaagaacgctcaggatgtg
gatgtaggccgaaataatattgaaaactatataatcagtcctaactcctattttcgggtc
atcacccgaaaacgcagtgatggcaagaaatatcccgaacttgtgctggacaaagtgcta
gatcgtgaagaggaacctgatctcaggttaaccctcactgctcaggatggcggctctcca
cccaggtctggcaccgctcagatttacatcgaagtcgtggatatcaacgataacgcccct
gaatttgagcagcctttctatagggtgcagatccctgaggacagtccagtaggcttcctg
attgccaacgtctctgctacggatgtagacatgggagtcaatggagagatttcctattca
cttttccaggcttcagaagagattagcaaaacctttgaaatcagccccatgacaggagaa
attcgactgaaaaaacaacttgattttgaaacaactcagtcctatgaggtcaatatcgag
gccagagatactggaagtctttctggaaaatgtactgttctgattcaagtcatggatgtg
aacgacaatgcccctgaagtcaccatgtctgcacttaccagacagatccctgaaaaccgg
cccgagacggtggttgcagttttcagtgtttcagatcttgattcggaagagaatgggaaa
atacgttgctccattcaggacgatctaccttttttcttgaaatcctccagaaaataccct
gagctggtactggacaaagagctggatcgggaggaggagcaagaaatctcattaacccta
acagcattggatggcggctctccgcctcggtatgggactgtccaggtgcacattgaagtg
gttgacagcaacgataatgcccccgagtttgagcagtcgctctacaaggtgcatattcct
gagaacagccctgtgggttcactggttgtcactgtctctgccagcgatgtagacagtgga
gtctacgggaaaatatcatatacattctttcagccttcagaagatactagtaaaactttg
gaggtaaaccctatgacaggcgaaattcgactaagaaaacaagtagattttgaaacagtt
ctgtcttatgaagtggacatcaaggctactgatgggggaggtctttcaggaaaatgcact
cttctcctgcagatagtggatgtgaatgataatcccccagaagtgacaatctctgcactc
accagccccatccctgagaactcgcctgagattatggttgcagttttcagtgtttcagat
cctgactccggggacaatgggaaaactatttcctccatccaggacgaccttccttttctt
ctaaaaccttcagtcaagaacttttactccttggtaaccaggagagcactagatagagaa
gaaagggccgagtacaacatcaccatcactgtcacagacatggggactcccagactgaaa
acccagcacaacataacggtgctggtgtccgacgtcaacgacaacgcc

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