Vicugna pacos (alpaca): 116277662
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Entry
116277662 CDS
T08098
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
116277662
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Protocadherins
116277662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116277662
NCBI-ProteinID:
XP_031528057
UniProt:
A0A6J3A444
LinkDB
All DBs
Position
3
AA seq
797 aa
AA seq
DB search
METAPSKTLQKRQVIFLALLLLLWEAGSEAIRYSMPEETESGSFVANLSRDLGLRVGELA
ARGARIHYKGNKQLFQLDKTTGNLLLYEKLDREGLCGATDTCILHFQLLLENPVQFFQAE
LQLTDINDHSPEFLEREMLLKIPENVHRGTVFSLKTAQDFDIGSNTIQNYTISTNSHFHV
VTHNRGDGRKYPELVLEKALDREEQPELRLTLTALDGGAPPRSGTTTVRIEVVDINDNAP
EFLQSLYEVQIPENSPLHSLVVVVSARDLDAGTNGNVAYALFQGDEVTQPFVIDKVTGEI
RLKRALDFEVTRYYNVEIAATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLTSSTPENFP
ETVVAVFSVSDPDSGDNGRMVCAIQNDLPFLLKPTFKNFYTLVTERPLDRESKAEYNITI
TVTDMGTPRLKTQHSITVLVSDVNDNAPAFTQASYTLRVRENNSPALHIGTVSATDTDAG
ANAQVTYSLLPPADPHVPLASLVSINADNGHLFALRSLDYEALRAFEFRVGAADRGSPPL
SSQALVRVLVEDDNDNAPFVLYPLQNTSAPCTELLPRAAEPGYLVTKXVAVDGDAGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAARHRLLVLVKDNGQPPLSASVTLHVL
LVDGFSQPHLPPPEAEAEAAAAAPADALTVYLVVALASVSSLFLFSVLVFVAVRLCGRGG
AARAGRCSVPEGPFPGHLVDVSGTGTLSHSYQYQVCLTGGSGLNEFKFLKPVLPNPTRGA
CEEIEANATFRNSFGFN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgccatcaaaaacgctacagaaaaggcaagttatctttcttgctcttttg
ttgcttttgtgggaggctggctctgaagcaattaggtattccatgccagaagaaacagaa
agtgggtcctttgtggccaacttgtcaagagacctggggctcagggtgggggaactggcc
gctcggggtgcacgaatccattacaaaggaaacaaacagctcttccagttggataaaacg
accgggaatttgcttctatatgaaaaactagaccgggaggggctgtgtggggcgacagat
acctgtatactgcacttccagctattactggaaaacccggtgcaattttttcaagctgag
ctgcagctcacagatataaacgaccattccccagagttcctagaaagggaaatgctccta
aaaatcccagaaaacgttcacagaggtactgtattttctttgaaaacagctcaggatttt
gacataggtagcaacactattcagaactacacaatcagcaccaactcccattttcatgtt
gtcactcataatcgcggagatggtagaaaatacccagagctggtgctagaaaaagcgcta
gatagggaggagcagcccgagctcaggttaaccctcacagcgctggatggtggggctccg
cccaggtctgggaccactacagttcgtattgaagtcgtggatatcaatgataacgcccct
gagtttttacagtcgctctatgaggtacagatcccagaaaacagccccctacactcttta
gttgttgttgtctcagccagagatttagatgcaggaacgaatgggaatgtagcctatgct
ctattccaaggtgatgaagttactcaaccgtttgtaatagacaaagtaacaggagaaatt
cgtctgaagagggcattggattttgaggtaactcgatattataacgtggagattgcagcc
acagacggcgggggcctttcaggaaaatgcactgtagctatagaggtggtggatgtgaat
gacaacgcccctgaactgaccatgtcgacgctcaccagctctaccccagaaaacttccca
gaaaccgtagttgctgttttcagtgtttctgatccagattctggggacaacggtaggatg
gtttgcgccatccagaatgatctcccttttctcctgaaacccacattcaaaaacttttac
accctagtaacagagaggccactggacagagagagcaaagccgaatacaacatcaccatc
actgtcacagacatggggactcccagactgaaaacccagcacagcataacggtgctggtg
tccgacgtcaacgacaacgcccccgccttcacccaggcctcctacaccctgcgggtccgc
gagaacaacagccccgcgctgcacatcggcaccgtcagcgccacagacacagacgcaggc
gccaacgcccaggtcacctactcgctgctgccgcccgccgacccgcacgtgcccctggcc
tccctcgtgtccatcaacgccgacaacggccacctgttcgccctgcggtccctggactac
gaggccctgcgcgccttcgagttccgcgtgggcgccgccgaccgcggctcgccgccgctg
agcagccaggcgctggtgcgcgtgctcgtggaggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacacctcggcgccctgcaccgagctgctgcccagggcggccgag
ccgggctacctggtgaccaagntggtggcggtggacggcgacgcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggccaggccgctgagcgagcgcgacgcggccaggcacaggctgctg
gtgctggtcaaggacaacggccagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccccacctgccgcccccggaagcggaagcggaggcggcg
gccgcggcgccggccgacgcgctcaccgtctacctggtggtggccttggcgtccgtgtcg
tcgctcttcctcttctcggtgctggtgttcgtggcggtgcggctgtgcgggcggggcggg
gcggcgcgggcgggtcgctgctcggtgcccgagggccccttcccgggccacctggtggac
gtcagcggcaccgggaccctgtcccacagctaccagtaccaggtgtgtctgactggaggt
tccgggttaaatgagtttaaattcttgaagcctgttctccccaaccctacccggggcgct
tgtgaagaaatagaggcaaacgccaccttccggaatagctttggatttaattag
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