Variovorax paradoxus B4: VAPA_1c00600
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Entry
VAPA_1c00600 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c00600
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_1c00600
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
HTH_20
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AGU47191
UniProt:
T1X433
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Position
1:complement(57629..58573)
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AA seq
314 aa
AA seq
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MNFQQLRSVREAVRCGFNLTEVAHALHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT
EPGGHVLPIIERMLMESSNLRHAGQEFVAQQSGLLSVAATHSQARYAMPVAVQEFRAQFP
NVKLHLHQGSPKQIAQMLIDGEADVGIATEALGDYPQLVALPCYRWTHSVIVPPGHALLD
APLTLEALTRHPLITYDTGFTGRSRIDEAFAQRGLAPNIVLAAMDADVIKTYVQLGMGVG
IVAGVAYETERDTQLRALDAGRLFGINMTKLAVRRGNYLRKYVHAFIESFAPTLTRAVVE
KALGDEAKGSHCEI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccaacaactgcgctcggtacgcgaggccgttcgttgcggcttcaacctgacc
gaggtcgcccatgcccttcatacctcccagccgggcgtgagccggcagatccgcgagctg
gaggaagagctcggcatcgaactcttcgtgcgtgccggcaagcggctcaccgggctcacc
gagccgggcggccacgtgctgccgatcatcgagcgcatgctgatggagagcagcaacctg
cggcatgccggccaggagttcgtggcgcagcagagcggcctgctctcggtggcggccacg
cattcgcaggcgcgctatgcgatgccggtggcggtgcaggaattccgcgcgcagtttccc
aacgtgaagctgcatctgcaccagggctcgcccaagcagatcgcgcagatgctgatcgac
ggcgaagccgacgtgggcatcgcaacggaggcgctgggcgactatccccagctggtggcc
ctgccctgctaccgctggacgcattcggtcatcgtgcctccgggccatgcactgctggat
gcgccgctgacgctcgaggcgctcacgcgccatccgctgatcacctacgacaccggcttc
accgggcgctcgcgcatcgacgaggcctttgcacagcgcgggctcgcgcccaacatcgtg
ctggccgcgatggacgccgacgtgatcaagacctacgtgcagctgggcatgggcgtgggc
atcgtggccggcgtggcgtacgagacggagcgcgacacgcagctgcgcgcgctcgatgcg
ggccggctcttcggcatcaacatgaccaagctcgcggtgcggcgcggcaactatctgcgc
aagtacgtccatgccttcatcgagtcattcgcacccacgttgacgcgggcagtggtcgaa
aaggctctgggcgatgaagcgaagggatcgcactgcgaaatctag
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