Variovorax paradoxus B4: VAPA_1c00840
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Entry
VAPA_1c00840 CDS
T02835
Symbol
acoR
Name
(GenBank) putative acetoin catabolism regulatory protein AcoR
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c00840 (acoR)
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
Other families
VAPA_1c00840 (acoR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
Mg_chelatase
AAA_5
AAA
AAA_2
AAA_16
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGU47215
UniProt:
T1X4X6
LinkDB
All DBs
Position
1:complement(82359..84398)
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AA seq
679 aa
AA seq
DB search
MTSLQSRHIDNVYSIATGTALADPAASLVHKSWARCVREHGLDPTRPSPARILPAQEVRA
HQQQLEHFLRAARAGMEDIYRRVADLGYMVLLTDAEGITVDYIGNPAWDDQLRKAGLYLG
ADWNEAHAGTCGVGTCLVERQPMTCHQTEHFDATHIALTCTTAPLFDHSGKLTAILDVSA
LRSPEARESQHLVRHLVSIYARMIEDADFLRSFRGHWILRLGTAYGLVDVAGEVMLAFDE
GGTVVGANGGARQALAGNPLGREVSQLLHMPMDAIWRIGNGGASAMPFAHTVLLPGGGEY
HASLLAPRVRRAAAPAAAASGNARPCDRLPPLERIAGNDPAMQKLLAQARRLVDRGIHVL
VEGETGSGKEVLARALHGASSRAAMPFVAVNCAAIPDSLIESELFGYTPGSFTGGRAKGM
KGLIAQADHGTLFLDEIGDMPMALQTRLLRVLSEGEVLPLGAESPQRVDIAVVAATHRHL
PELVAAGRFREDLYYRLCGAVLKLPPLRARGDRRYLIEAMFNEEAAAMRSSTARLSDAAL
QRLLAHAWPGNLRELRNVLRLALALCADGTVSAEISSFPPPRCRGGGAAARRSRRGRRWP
RPCERGRTARLAPAPSLARGACGSRTWRVPRHRVPAHEAARHRTATADVSRALAATDVAP
VSHATGDSPGRATKPLPSH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacttccctgcaatcgcgtcacatcgacaacgtctattcgatcgccaccggcacggcg
ctggccgacccggcggcgagcctggtccacaagtcttgggcgcgctgcgtgcgcgagcat
gggctcgacccgacgaggcccagccccgcgcgcatcctgccggcacaggaggtgcgggcg
caccagcagcagctggagcatttcctgcgcgcggcgcgtgccggcatggaggacatctac
cgccgcgtggcggacctcggctacatggtgctgctgaccgacgccgaaggcatcacggtc
gactacatcggcaacccggcctgggacgaccagctccgcaaggccggcctctacctgggc
gccgactggaacgaggcccacgcgggcacttgcggcgtgggcacctgcctggtcgaacgc
cagccgatgacctgccaccagaccgagcacttcgatgccacgcacatcgcgctgacctgc
acgacggcgccgctgttcgaccacagcggcaagctcacggcaattctcgacgtgtcggcg
ctgcgctcgcccgaggccagggagagccagcacctcgtgcggcacctggtgtcgatctat
gcgcggatgatcgaggacgccgatttcctgcgcagcttccgcggccactggatcctgcgg
ctgggcacggcctacgggctggtcgacgtggcgggcgaggtgatgctggccttcgacgaa
ggcggcacggtggtcggcgccaacggcggtgcacggcaggccttggccggaaacccgctg
ggccgcgaggtatcgcagctgctgcacatgccgatggacgcgatctggcgcatcggcaac
ggcggcgcatcggccatgcccttcgcacacacggtgctgctgccgggcggcggcgaatac
cacgcctcgctgctggcgccgcgcgtgcgccgggcggcagcgcccgcagctgccgcatcg
ggcaatgcccgtccctgcgatcgcctgccgccactcgagcgcatcgccggcaacgacccg
gccatgcagaagcttctcgcgcaggcacgccgtctggtggaccgcggcattcatgtgctg
gtcgaaggcgaaaccggcagcggcaaggaagtgctggcgcgcgcattgcacggcgcgagc
agccgtgcggcgatgcccttcgtggcggtgaactgcgccgccattcccgattcgctgatc
gagagcgaactcttcggctacacgcccggcagtttcaccggcggccgtgccaagggcatg
aaagggctgatcgcgcaggccgaccacggcacgctgttcctcgacgaaatcggcgacatg
ccgatggcgctgcagacgcggcttttgcgcgtgctgtccgaaggcgaggtgctgccgctg
ggagcggaatcgccgcagcgcgtggacatcgcggtggtggcggccacgcaccggcacctg
ccggaactggtggccgcagggcgcttccgcgaagacctgtactaccgcctgtgcggcgcg
gtgctgaagctgccgccgctgcgcgcgcggggcgaccggcgctacctgatcgaggccatg
ttcaacgaggaagccgcggcgatgcgctcttccaccgcgcggctgtccgacgcggcactg
cagcggctgctggcgcacgcgtggcccggcaacctgcgcgagctgcgcaacgtgctgcga
ctggcgctcgcgctgtgcgcggacggcacggtgagcgcggagatctccagcttcccgccc
cctcgatgccgcggcggcggtgccgccgcccgtcgctcgcgccgaggccggcgatggccg
cgaccttgcgagcgcggacgaactgcgcgccttgctccagcgccatcgctggcacgtggc
gcgtgcggcagccgaacttggcgtgtgccgcgccaccgtgtaccggcacatgaagcggca
cggcatcgcaccgccacagcggatgtgagccgggccctcgctgcgacagatgtcgcaccg
gtgtcgcatgcgacaggcgacagcccggggcgtgcgacaaaaccgctgccaagtcattga
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