Variovorax paradoxus B4: VAPA_1c00870
Help
Entry
VAPA_1c00870 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, permease protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c00870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c00870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c00870
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
SYS1
Motif
Other DBs
NCBI-ProteinID:
AGU47218
UniProt:
T1X3Q0
LinkDB
All DBs
Position
1:complement(85996..86970)
Genome browser
AA seq
324 aa
AA seq
DB search
MTQVHTSSMRRGAFLVPVICAIAIGVLGPLMGNYVSDFVVKVMILSIFALSLELLVGMTG
LVSLGHAAFYGIGAYVTVLASGSEGGNLALLLPLAMGAAALYALFVGALSLRTRGVYFIM
VTLAFAQMAFFVFHDTKVGGGSDGIYMYVRPAIGKLDMENRMVLFYVVLASLVFTYGLLA
LVRRSRFGAALAGIRVNEQRMRAAGFPVYGYKLAAFVLAGALAGLAGFLLASRDGVVNPE
LMAWHNSGEVLLMVILGGLGHLRGAVIGAIAFTLLKEIFSTHAVMGPLADHWQLTLGIAI
IVFVAWLPKGLIGLAKRLSPKGAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggtccacacttcctccatgcggcgcggcgcgtttctcgtgccggtgatctgc
gccattgccatcggcgtgctgggcccgctcatgggcaactacgtctcggacttcgtcgtc
aaggtgatgatcctgtcgatcttcgcgctgagcctcgaactgctcgtcggcatgacgggg
ctcgtgagcctgggccatgcggcgttctacggcatcggcgcctacgtcacggtgctggct
tccggcagcgaaggcggcaacctcgcgctgctgctgccgctggccatgggcgcggcggcg
ctctatgcattgttcgtgggcgccctgagcctgcgcacgcgcggcgtgtacttcatcatg
gtgacgctggccttcgcgcagatggccttcttcgtgttccacgacaccaaggtcggcggc
ggcagcgacggcatctacatgtacgtgcggcccgccatcggcaagctcgacatggaaaac
cgcatggtgctgttctacgtggtgctcgcatcgctggtgttcacctacgggctgctggcg
ctggtgcgccgctcgcgcttcggcgcggcgctcgcgggcatccgcgtgaacgagcagcgc
atgcgcgcggcaggattcccggtgtacggctacaagctcgcggccttcgtgctggcgggt
gcgctggccgggctcgcgggctttctgctggcctcgcgcgacggcgtggtcaaccccgag
ctgatggcctggcacaattcgggcgaggtgctgctgatggtgatcctcggcggtctcggc
cacctgcgcggtgcggtcatcggcgccattgcgttcacgctgctgaaggaaatcttctcg
acgcacgccgtgatggggccgttggcggaccactggcagctgaccctgggcattgcgatc
atcgtgttcgtggcgtggctgcccaaggggctgatcggcttggcaaagcggctctcgccg
aagggggctgcatga
DBGET
integrated database retrieval system
