Variovorax paradoxus B4: VAPA_1c01130
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Entry
VAPA_1c01130 CDS
T02835
Name
(GenBank) acetoacetate-CoA ligase
KO
K01907
acetoacetyl-CoA synthetase [EC:
6.2.1.16
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00280
Valine, leucine and isoleucine degradation
vpd00650
Butanoate metabolism
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VAPA_1c01130
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VAPA_1c01130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpd01004
]
VAPA_1c01130
Enzymes [BR:
vpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.16 acetoacetate---CoA ligase
VAPA_1c01130
Lipid biosynthesis proteins [BR:
vpd01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
VAPA_1c01130
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
ACAS_N
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGU47243
UniProt:
T1X3R9
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All DBs
Position
1:111021..113036
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AA seq
671 aa
AA seq
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MPAPNIPQIRLYQDWLRDQRGLSFDTYDALWRWSVTDLDAFWQSIWDYIGIASPTPHTAV
LADDRMPGARWFPGAQVNYAREVLRHADAAHAAGMAAIVSDNELGEVREMPWPELRRQVA
SVALTLKSLGVQRGDRVAAYLPNVPETMVAFLACSSIGAVWSVCAPDMGTAAVVDRFRQI
EPKLLIAADGVHYGAKPIDRSAVVQELRDALPSVQKLLLLRTPHAAQQLVADADWQGAIA
RSDAEVAAFEPEWLPFDHPIWIVYSSGTTGLPKPIVHGQGGIIMTMYACGLHNDIGASYG
ANNFDERFHWYSSTGWVMWNCQLAGLAFGATIVIYDGHPAGSKEKPDWAVLWRFAAKHRI
SFFGAGAAYFTNCMKAGVVAAECGDLSRVRALGSTGSPLSEEVQRWGTAQLLAAGADSVW
WCNISGGTDFCGAFVGGNRELPEVPGQMQCRQIGHAVEAWNEDGKPVIGEVGELVCTRPI
PSMPLYFWGDEGNARYLSSYFDTYPGVWRHGDWIRIGEDGGCIIYGRSDATINRQGLRMG
TSEIYSAVEALPEVLDSMVVDLEYLGRESYMPLFVVLRPGVALDDAMRAKINNAIKTSLS
PRFAPNDIFQVAEIPRTLSGKKQELPIKKLLLGQPLEKVVNREAMANPGSLGWYVEFAAR
RAGAPQGISSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccccaacattccccagatccgcctctaccaggactggctgcgcgaccagcgc
ggcctgtcgttcgatacctacgacgcgctgtggcgctggtccgtgaccgacctcgacgct
ttctggcagagcatctgggactacatcggcatcgcgtcgcccacgccgcacacggcggta
ctggccgacgaccgcatgcccggcgccaggtggtttccgggcgcgcaggtcaactatgcg
cgcgaggtgctgcgccatgccgacgcggcccatgcggccggcatggccgccatcgtgagc
gacaacgaactgggcgaagtgcgcgagatgccgtggcccgagctgcgtcgccaggtggcc
tcggtcgcgctcacgctcaagtcattgggtgtgcagcgcggcgaccgcgtggccgcctac
ttgcccaacgtgccggagaccatggtggcgtttctcgcgtgttcgagcatcggcgcggtg
tggagcgtgtgcgcgcccgacatgggcacggccgccgtggtcgaccgcttccgccagatc
gagcccaagctgctgatcgccgccgacggcgtgcactacggcgccaagcccatcgaccgc
agcgcggtcgtgcaggagctgcgcgatgcgctgcccagcgtgcagaagctgctgttgctc
agaacgccgcatgccgcgcaacagctcgtcgccgatgccgactggcaaggcgccatcgcg
cgcagcgatgccgaggtggcggccttcgagcccgagtggctgcccttcgaccatccgatc
tggatcgtctattcgagcggcaccaccggcctgcccaagcccatcgtgcacgggcagggc
ggcatcatcatgacgatgtatgcctgcggcctgcacaacgacatcggcgcgagctacggc
gccaacaacttcgacgagcgttttcactggtacagctcgaccggctgggtgatgtggaac
tgccagctcgcgggcctggccttcggcgcgaccatcgtcatctacgacggccacccggcc
ggcagcaaggagaagcccgactgggccgtgctgtggcgctttgccgcgaagcaccgcatc
agcttcttcggtgccggcgcggcctacttcaccaactgcatgaaggccggcgtggtcgcg
gccgagtgcggcgacctgtcgcgcgtgcgcgcgctcggcagcaccggctcgccgctgtcg
gaagaggtgcagcgctggggcacggcgcagctgctggccgcgggcgccgacagcgtgtgg
tggtgcaacatctcgggcggcacggatttctgcggcgccttcgtcggcggcaaccgcgag
ctgcccgaagtgcccggccagatgcaatgccgccagatcggccatgcggtggaggcctgg
aacgaggacggcaagcccgtcatcggcgaagtgggcgagctggtctgcacgcggcccatt
ccgtcgatgccgctgtacttctggggcgacgaaggcaatgcgcgctacctgtcgagctat
ttcgacacctacccgggtgtctggcgccacggcgactggatcaggatcggcgaggacggc
ggctgcatcatctacggccgcagcgacgccaccatcaaccgccagggcctgcgcatgggc
accagcgagatctacagcgccgtggaggccctgcccgaagtgctcgactcgatggtggtc
gatctcgaatacctcggccgcgaaagctacatgcccctgttcgtggtgctgcgccccggc
gtggcgctcgacgacgcgatgcgcgcgaagatcaacaacgccatcaagacctcgctctcg
ccgcgcttcgcgcccaacgacatcttccaggtggccgagatcccgcgcaccctctcgggc
aagaagcaggagctgccgatcaagaagctgctgctgggccagccgctcgagaaagtggtc
aaccgcgaggccatggccaaccccggctcgctcggctggtacgtggagtttgccgcgcgg
cgcgccggagcccctcagggcatcagcagttcgtag
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