Variovorax paradoxus B4: VAPA_1c01220
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Entry
VAPA_1c01220 CDS
T02835
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c01220
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VAPA_1c01220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_24
HTH_23
HTH_Crp_2
Dimerisation
TrmB
Dimerisation2-like_dom
HTH_47
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AGU47252
UniProt:
T1X2X1
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All DBs
Position
1:complement(122360..123193)
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AA seq
277 aa
AA seq
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MTDSSSPRSSSKAAGKVTRIDRDGDGTVQSLTRAMQLLELLADDDEGYRLVDIAARSGLS
SSTAHRLLTTLEQRQFVQFDRETSLWYVGVRCFSVGAAFGRRRRIAHLALPVMRRLRDSS
GESINLGIADLGDIVFVTQVESRELMRAIGKPGFRAPLHGTAMGQAILAAMAEDDVLQYL
RTYGLPKLTPNTIARASRLHETLGEVRRAGYAVDDEQNAVGLRCIAAAIRDEHGQPFGAI
SLVGPTQRIKAADFAQLGATVRGAADEITAAYGGRLK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacggacagcagctccccccgctcctcctccaaggccgccggcaaggtcacgcgcatc
gaccgcgacggcgacggcaccgtgcagtcgctcacgcgggccatgcagctgctcgaactg
ctggccgacgacgacgagggctaccgcctggtcgacatcgcggcgcgcagcggcctgtcg
tcgtccaccgcgcaccgcctgctcaccacgctggagcagcgccagttcgtccagttcgac
cgcgaaaccagcctctggtacgtgggcgtgcgctgcttctcggtgggcgcggccttcggg
cgccggcgccgcatcgcgcacctggcgctgccggtgatgcggcggctgcgcgacagctcg
ggcgaaagcatcaacctgggcattgccgacctgggcgacatcgtgttcgtcacgcaggtg
gaaagccgcgagctgatgcgcgccatcggcaagccggggttccgcgcgccgctgcacggc
acggccatggggcaggccatcctggccgccatggccgaggacgacgtgctgcagtacctg
cgcacctacggcctgcccaagctcacgcccaacaccattgcgcgcgcgtcgcggctgcac
gaaaccctgggcgaggtgcgccgggcgggctatgcggtggacgacgagcagaacgccgtg
ggcctgcgctgcattgccgccgccatccgcgacgagcacggccagcccttcggcgcgatc
tcgctggtggggccgacgcagcgcatcaaggcggccgacttcgcgcagctcggcgccacg
gtgcgcggcgccgccgacgagatcaccgcggcctacggcgggcgcctgaagtag
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