Variovorax paradoxus B4: VAPA_1c01230
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Entry
VAPA_1c01230 CDS
T02835
Name
(GenBank) D-hydantoinase
KO
K01464
dihydropyrimidinase [EC:
3.5.2.2
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00240
Pyrimidine metabolism
vpd00410
beta-Alanine metabolism
vpd00770
Pantothenate and CoA biosynthesis
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VAPA_1c01230
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VAPA_1c01230
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
VAPA_1c01230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpd04147
]
VAPA_1c01230
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.2 dihydropyrimidinase
VAPA_1c01230
Exosome [BR:
vpd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VAPA_1c01230
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Motif
Pfam:
Amidohydro_1
Amidohydro_3
Urease_alpha
Motif
Other DBs
NCBI-ProteinID:
AGU47253
UniProt:
T1X3S6
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All DBs
Position
1:complement(123276..124703)
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AA seq
475 aa
AA seq
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MSSHSAFDLVIRNAQAVTASDTFHCDIGVREGRIVQLGLALAGGAREIDAAGRAVTPGGV
DAHCHLDQPMPAPMRMADGFASGTRSAACGGTTTVIPFAAQAKGQSLRAAVDDYHRRAEG
QAHVDYAFHLIVSDPTPTVLREELPALIREGYSSFKIYMTYDDLKLDDGQVLDVLDVARA
HGAMAMIHAENADCIEWLTRRLEAAGRTAPRYHAHARPMLVEREATHRAIALAELVDVPI
LVVHVSGREAVEQIRWARAHGLSVFAETCPQYLFLTAEDLGIDDSYQGAKCVCSPPPRDK
ANQQVIWDGLNDGLFTVFSSDHAPFRFDDPQGKKPGGQEVGFRHIPNGIPGLETRMALLW
SEGVMAGRITPQKFVELTATNPAKAYGLHPRKGSIAVGGDADLVIWEEREFVLGNARLHH
DVDYTPYEGMHLSAWPAMTLARGEVVWDGTTFTGRTGHGRFLPCGAPTLQPRRRG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccactcggccttcgacctggtgatccgcaatgcgcaggccgtcacggccagc
gacaccttccactgcgacatcggggtgcgcgaggggcgcatcgtgcagctcggcctcgcg
ctggccggcggtgcgcgcgagatcgacgcggccggccgggcagtgacgcccggcggcgtc
gatgcccactgccacctcgaccagccgatgcccgcccccatgcgcatggccgacggcttt
gccagcggcacacgcagcgcggcctgcggcggcaccaccacggtgattcccttcgcggcg
caggccaaggggcagtcgctgcgcgcggcggtggacgactaccaccgccgcgccgaaggc
caggcgcatgtcgactacgcctttcacctgatcgtgagcgacccgacgcccacggtgctg
cgcgaggagctgccggcgctgatccgcgagggctacagctcgttcaagatctacatgacc
tacgacgacctcaagctcgacgacggccaggtgctggacgtgctcgacgtcgcgcgcgcg
cacggcgccatggccatgatccatgccgagaacgccgactgcatcgaatggctcacgcgc
cgcctcgaagcggccgggcgcaccgcgccgcgctaccacgcgcatgcgcggccgatgctg
gtggagcgcgaggccacgcaccgcgcgattgcgctggccgaattggtcgacgtgccgatc
ctggtcgtgcacgtgtcgggccgcgaggcggtcgagcagatccgctgggcgcgtgcgcac
gggctcagcgtgttcgccgagacctgcccgcaatacctcttcctcacggccgaagacctg
ggcatcgacgacagctaccagggcgccaagtgcgtgtgcagcccgccgccgcgcgacaag
gccaaccagcaggtgatctgggacgggctcaacgatggcctcttcacggtgttctcgtcc
gaccacgcgccgtttcgcttcgacgacccccagggcaagaagccgggcggccaggaggtc
gggtttcgccatattcccaacggcattccgggcctggaaactcgcatggcgctgctgtgg
tccgaaggggtgatggccgggcgcatcacgccgcagaagttcgtcgagctcaccgccacc
aacccggccaaggcctacggcctgcacccgcgcaaggggagcatcgcggtcggcggcgac
gccgacctggtgatctgggaggagcgcgagttcgtgctcggcaatgcacggctgcaccac
gatgtcgactacacgccctatgaaggcatgcatctgtcggcctggccggccatgacgctg
gcgcgcggcgaggtggtgtgggacggcacaaccttcaccggccgcaccgggcacgggcgc
ttcctgccatgcggcgcgcccacgctgcagccccggcggcgcggctga
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