Variovorax paradoxus B4: VAPA_1c01460
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Entry
VAPA_1c01460 CDS
T02835
Name
(GenBank) putative branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c01460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c01460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c01460
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c01460
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_5
Peripla_BP_6
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AGU47276
UniProt:
T1X4B5
LinkDB
All DBs
Position
1:complement(145322..146476)
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AA seq
384 aa
AA seq
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MADKDPIRVGILYSETGVTSTIGLSQLQGALLAIEEINEAGGVDGREIVAVRYDPQSNPA
RYAQLAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPTLYEGFEYSGNVIYTG
AAPNQNSVQLAEFMTTNFGSRVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVALD
ATEKDYRAIMDDIRHKRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPISSLTTSEAEIS
QMGPGVATGHFTAAPYFQSIDSAANRRCLARLRERFGDGCVPNLCWEASYFQMHIFANAF
RQSGSDGIAEILPHILGSEFDAPQGRVKIDPANHHTCLYPRIGRVDAHGQFTIVRQATRA
VYPDPYLVTHSLGDWTARLDTLEL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacaaggaccccattcgcgttggcatcctgtactcggaaaccggcgtcacttcg
acgatcgggctgtcgcagctgcagggcgcgctgctcgccatcgaggaaatcaacgaagcc
ggcggcgtcgacggccgcgagatcgtggcggtgcgctacgacccgcaatccaaccctgcg
cgctacgcccagctggccgagaagctgatcgtgcaggaccgtgtcaatgtgatcttcggg
tgctacatgtcgagcagccgcaaggccgtgatcccggtgatcgagaaatggaacaagctg
ctgttctaccccacgctctacgagggcttcgagtactcgggcaacgtcatctacaccggc
gccgcacccaatcagaacagcgtgcagctggcggagttcatgaccacgaacttcggttcg
cgcgtctacctgatcggctccgactacatctatccctacgagtcgaaccgcatcatgggc
gagctggtgatgcagcgtcccggcagcgagaaactcggcgagcgctacgtggcgctcgac
gccaccgaaaaggactaccgcgcgatcatggacgacatccgccacaagcggcccgacttc
atcttctcgaccgtggtgggtgactccacggcgagcctctaccgcgcgtacgcggaagcg
ggcttcgatccgaagacgatgccgatctcgagcctcaccacatcggaggccgagatctcg
cagatggggcctggcgtggccacggggcacttcaccgcggcgccgtatttccagtcgatc
gactcggccgccaaccggcgctgcctcgcgcggctgcgcgaacgcttcggcgacggctgc
gtgcccaacctgtgctgggaggcctcgtatttccagatgcacatcttcgccaatgcgttc
cgccaatcgggcagcgacggcattgcggagatcctgccgcacatcctgggcagcgagttc
gatgcgccgcaggggcgcgtgaagatcgatccggcgaaccatcacacctgcctttacccg
cgcatcgggcgggtcgatgcgcacgggcagttcaccatcgttcggcaggcgacgcgcgcg
gtgtaccccgatccttatctggtcactcactcgctgggcgactggacggccaggctcgat
acgctggagctctag
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