Variovorax paradoxus B4: VAPA_1c01670
Help
Entry
VAPA_1c01670 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c01670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c01670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c01670
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_22
AAA_29
AAA_16
AAA_23
nSTAND3
ATP-synt_ab
MMR_HSR1
NACHT
RepB-RCR_reg
NB-ARC
AAA_24
Roc
Septin
Motif
Other DBs
NCBI-ProteinID:
AGU47297
UniProt:
T1X314
LinkDB
All DBs
Position
1:complement(167287..168009)
Genome browser
AA seq
240 aa
AA seq
DB search
MDAPIAMSEVLAFDHVTAGYGNAVVLDRLDFSLQQGESLAILGRNGVGKTTLLETLMGNT
RVMQGAVRWQGEDITRWPSHRRARAGLGWVPQEREVFPSLTVEENLTVIARPGGWNLQRV
YDFFPRLRERRSNYGNQLSGGEQQMLAIGRALMTHPKLLLLDEPMEGLAPIIVEELAAAI
RRLCEAEGLASVVVEQHPVLALEMTHRAIVLERGTVVHAGPSNELAADHGLLEGLLGVGV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttggacgctcccatcgccatgtctgaagtgcttgccttcgaccacgtcacggccggctac
ggcaacgccgtggtgctcgaccgtctcgacttttcgctgcagcagggcgaaagcctcgcc
atcctcgggcgcaacggcgtgggcaagaccacgctgctggaaacgctgatgggcaacacc
cgcgtgatgcagggcgcggtaaggtggcagggcgaagacatcacgcgctggccctcgcac
cggcgcgcgcgcgcgggcctgggctgggtgccgcaggagcgcgaggtgtttccctcgctc
accgtggaagaaaacctcacggtgatcgcgcggccgggcggctggaacctccagcgcgtc
tacgacttctttccgcgcctgcgcgagcggcgcagcaactacggcaaccagctctccggc
ggcgagcagcagatgctcgccatcggccgcgcgctgatgacccatccgaagctgctgctg
ctcgacgaaccgatggaaggcctggcgccgatcatcgtggaagagctggccgccgcgatt
cgccgcctgtgcgaggccgaaggtctggcgtccgtcgtcgtggagcagcaccccgtgctg
gcgctggagatgacgcaccgcgcgatcgtgctggagcgcggcaccgtggtgcatgccggg
ccgagcaacgagctggccgccgatcacggcctgctcgaagggctgctcggcgtcggggtc
tga
DBGET
integrated database retrieval system
