Variovorax paradoxus B4: VAPA_1c01710
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Entry
VAPA_1c01710 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c01710
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c01710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c01710
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
Motif
Other DBs
NCBI-ProteinID:
AGU47301
UniProt:
T1X4D8
LinkDB
All DBs
Position
1:complement(170931..172127)
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AA seq
398 aa
AA seq
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MTTMTKRTVLSTLLLAGFGLLGSAAQAADEPLRIGLIATYSGPYADYGRQFDAGIALYLK
EHGGKVGGRTVEIIKKDTAGPAPDAAKRIAQELIVRDKVNVLTGLDFSPNAYAVGAIATQ
AKIPTIVMNAASSAITTSSPYVARLSFTVQQVTDPMARYMLKEGIKDAYTVVADYASGVD
AETAFKKTFTAGGGKVSGEVRTPMNNPDFSAYVQRIKDAKPQAVFFFFPSGVMPPAFLKV
WKERGMEQAGIKLYATGEATDDSYLDATGDVALGLVTSHHYSFAHPSPKNQKFVKDFAAD
NGAKLRPSYFAVTAYDAMAAIDLTLQKTKGDASGDKFMDALRGLRFESPRGPIEVDPLTR
DIVQTVYIRKTERVNGQLVNVEFDKFDRVKDPAKESSN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgatgacgaagagaaccgttctctccaccctcctgctcgccggcttcggcctg
ctcggcagcgcggcgcaggccgctgacgagccgctgcgcatcggcctcattgccacctac
tccggcccgtacgccgactacggccgccagttcgacgccggcatcgcgctctacctcaag
gagcacggcggcaaggtgggcgggcgcacggtcgagatcatcaagaaggacaccgccggc
cccgcccccgatgccgccaagcgcattgcgcaggagctcatcgtgcgcgacaaggtgaac
gtgctcaccggcctggacttcagccccaacgcgtatgccgttggcgccatcgccacgcag
gccaagatcccgacgatcgtgatgaacgccgcctcctcggccatcaccaccagctcgccc
tacgtggcgcggctgtcgttcaccgtgcagcaggtcaccgacccgatggcgcgctacatg
ctcaaggaaggcatcaaggacgcctacaccgtggtggccgactacgcctcgggcgtcgat
gccgagaccgccttcaagaagaccttcaccgccggcggcggcaaggtctcgggcgaggtg
cgcaccccgatgaacaaccccgacttctcggcctacgtgcagcgcatcaaggacgccaag
ccccaggccgtgttcttcttcttcccctcgggcgtgatgccgccggccttcctcaaggtg
tggaaggagcgcggcatggagcaggccggcatcaagctctacgccaccggcgaagccacc
gacgacagctacctcgacgccaccggcgacgtggcgctcggcctggtcaccagccaccat
tactcgttcgcgcacccctcgcccaagaaccagaagttcgtgaaggacttcgccgccgac
aacggcgccaagctgcgcccgagctacttcgccgtcacggcctacgacgccatggccgcc
atcgacctcacgctgcaaaagaccaagggcgacgcgagcggcgacaagttcatggacgcg
ctgcgcggcctgcgcttcgagagcccgcgcggcccgatcgaggtggacccgctcacgcgc
gacatcgtgcagaccgtctacatccgcaagaccgagcgcgtgaacggccagctggtgaac
gtggagttcgacaagttcgaccgcgtgaaggacccggccaaggaaagctcgaactga
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