Variovorax paradoxus B4: VAPA_1c02210
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Entry
VAPA_1c02210 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c02210
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c02210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c02210
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
MobB
AAA_29
MeaB
MukB
RsgA_GTPase
AAA_22
MMR_HSR1
BCA_ABC_TP_C
FtsK_SpoIIIE
SRP54
AAA_30
CLP1_P
nSTAND3
NACHT
T2SSE
DUF87
AAA_23
Zeta_toxin
AAA_16
TsaE
AAA_19
AAA_25
AAA_15
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AGU47351
UniProt:
T1X4I4
LinkDB
All DBs
Position
1:227176..227910
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AA seq
244 aa
AA seq
DB search
MSTHETLLKANSLCAWYGAAQILYDVDLEVRRGEVVALMGRNGAGKSTTLKTLIGMLAKR
KGNVSFLGHDISKSEPHHAAKLGLGFVPEDRRVFTDLTVMENLEVGKQPSRRWADGSEAP
LWTPERLFKLFPNLGEMPDRPGGRMSGGEQQMLTVARTLMGNPYLVLLDEPSEGVAPVIV
EQMANMILELKAQGVSILLSEQNMHFAELVSDRAYVLEKGQIRYHATMAELAANEEVRRA
YLSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcacgaaacactgttgaaggcgaactcgctgtgcgcctggtatggcgccgcg
cagatcctgtacgacgtcgatcttgaagtgcggcgcggcgaggtcgtcgcgctcatgggg
cgcaatggcgccggcaagtcgaccacgctcaagacgctgatcggcatgctcgccaagcgc
aagggcaacgtcagcttcctcggccacgacatctcgaagagcgaacctcatcacgcggcg
aagctcggcctcggtttcgtgcccgaagaccgccgcgtgttcaccgatctcacggtgatg
gagaacctcgaagtcggcaagcagccgtcgcgccgctgggccgacggcagcgaggcgccg
ctgtggacgcccgagcgcctgttcaagctctttcccaacctgggcgaaatgcccgaccgc
ccgggcggccgcatgagcggcggcgagcagcagatgctcaccgtggcgcgcacgctcatg
ggcaacccctacctggtgctgctcgacgagccctccgaaggcgtggcaccggtcatcgtc
gagcagatggccaacatgatcctggagctcaaggcgcagggcgtgagcatcctgctgtcg
gagcagaacatgcacttcgccgaactggtgtccgatcgcgcctacgtgctcgagaagggc
cagatccgctaccacgccaccatggcagagctcgcggccaacgaagaggtgcgccgtgcc
tacctgagcgtctag
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