KEGG   Variovorax paradoxus B4: VAPA_1c02330
Entry
VAPA_1c02330      CDS       T02835                                 
Name
(GenBank) type VI secretion protein, VC_A0110 family
  KO
K11896  type VI secretion system protein ImpG
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c02330
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c02330
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AGU47363
UniProt: T1X424
LinkDB
Position
1:240961..242832
AA seq 623 aa
MDARLLDYYNRELTYMHELGAEFAQRYPKIAGRLGMRGIEVSDPYVERLLEGFSFLTARI
QLKMDAEFPRFSQRLLEVVYPNFLAPLPAMAVVQIDGNLNEGSLKAGYELPRHTIMRGRM
IKGEQTACEFRTGHEVTLWPIRIADAGIGPVPAEIAHAMPAVAQRAKSAITIKLEAVGGT
TFAELPIDRLEFFLSGAELHALRVLELAVHHSIGTVCRSGPGSKARIVPLGDEAIRHEGF
DPEQALLPYDARSFQGYRLLHEYFAFPDRYLFFSVKNLRAAASAMGGTTMEIVILLDRAD
GDLERLVDAKHFSLFCTPIINLVPRRSDRIPVGPGQHEHHAVIDRTRPRDFEIFTVERVT
GHMASGSEEREFRPFLGSFAADDGDFGAYFSLRREPRLVSDRARAQGTRTSYTGSEVYVS
LVDQHDAPFPHSLRHITIDALCTNRDLPLLLPTGLESDFSLRVSAPVRGIRILRGPSRPY
PALAEGALTWRLISHLGLNYLSLTDIDATQGAAALREMLDLYGNLADPAVRRQIQGVRSM
ALAPVFRRLPEPGPIVFGRGVEIALKIDEVAFSGASPYLFGAVLEQFFSRHVSLNAFTEF
ALSSLQRGEIARWTPRIGRRPAV
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggacgcaaggctgctcgactactacaaccgcgagctcacctacatgcacgagctcggt
gccgagttcgcgcagcgctacccgaagatcgccgggcggctgggcatgcgcggcatcgag
gtcagcgacccgtacgtggagcgcctgctcgagggcttcagctttctcacggcgcgcatc
cagctcaagatggacgcggagtttccgcgcttttcgcagcggctgctcgaggtggtgtac
cccaacttcctcgcgccgctgcccgccatggccgtggtgcagatcgacggcaacctcaat
gaaggctcgctgaaggccggctacgaactgccgcgccacacgatcatgcgcgggcgcatg
atcaagggcgagcagacggcctgcgaattccgcaccggccacgaggtcacgctgtggccc
atcaggatcgcggatgcgggcatcggacccgtgcctgcagagatcgcgcatgcgatgccc
gcggtggcccagcgggccaagagcgcgatcaccatcaagctcgaagccgtgggcggcacc
accttcgccgagctgccgatcgaccggctcgagttctttctttcgggcgcggagctgcac
gcgctgcgcgtgctcgaactcgcggtgcaccacagcatcggcaccgtatgccgcagcggc
ccgggcagcaaggcgcggatcgttccgctcggcgacgaagccattcgccacgagggcttc
gatcccgagcaggcgctgctgccttatgacgcgcgctcgttccagggctaccggctgctg
cacgagtacttcgccttccccgaccgctacctgttcttcagcgtgaagaacctgcgcgcg
gcggcctccgccatgggcggcaccacgatggaaatcgtgatcctgctcgaccgcgccgac
ggcgacctggagcggctggtcgacgccaagcacttctcgctgttctgcacgcccatcatc
aacctggtgccgcgccgcagcgaccgcattccggtgggccccgggcagcacgagcaccat
gcggtgatcgaccgcacgcgtccgcgcgacttcgagatcttcaccgtcgagcgcgtcacg
ggccacatggcgagcggctcggaagagcgcgagttcaggcccttcctgggttcgttcgcc
gccgacgacggcgacttcggcgcgtacttctcgctgcgccgcgagccgcgcctggtgtcc
gaccgtgcacgcgcgcaaggcacccgcaccagctacaccggcagcgaggtgtacgtgtcg
ctcgtcgaccagcacgacgcgccctttccgcacagcctgcgccacatcacgatcgacgcg
ctgtgcaccaaccgcgacctgccgctgctgctgccgaccgggctggagtcggacttctcg
ctgcgcgtgtcggcgccggtgcgcggcatccgcatcctgcgcgggccgtcgcggccctat
cccgcgctggccgaaggcgcgctgacctggcgcctgatcagccacctgggcctcaactac
ctgagcctgaccgacatcgacgccacgcagggcgcggccgcattgcgcgagatgctcgat
ctctacggcaacctggccgaccccgcggtgcgccgccagatccagggcgtgcgctcgatg
gcgctggcgccggtgttccgccgcctgcccgagccgggaccgatcgtcttcgggcgcggg
gtggaaatcgcgctgaagatcgacgaagtggccttctcgggagcgagcccttatcttttc
ggcgccgtgctggagcagttcttcagccggcacgtgtcgctcaacgcgttcaccgagttc
gcgctctccagtctgcagcgcggcgagatcgcgcgctggacgccgcgcatcggacgccgc
ccagccgtatga

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