KEGG   Variovorax paradoxus B4: VAPA_1c02360
Entry
VAPA_1c02360      CDS       T02835                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c02360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c02360
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c02360
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: AGU47366
UniProt: T1X4J5
LinkDB
Position
1:246754..249138
AA seq 794 aa
MPNRVVKAHTPLGEDQLLFRSMHGTEGLSQLFEFEVDLLSPSVSLDMKSVLGKPLSLEIQ
TAGEPRFLNGQIVRFTMVGKEGGSSRYVLYRATVRPWLWYLTRTSDCKIFQNKSVVDILQ
EVFADYNFAFEKKLSGTYRQWEYCVQYQETDFAFVSRLMEHEGIYYYFKHEKGEHTLVLA
DDIGAHETLPGYPKISYLAADRNPDPFQEVIDQWQVTEEIRPGTYVVDDYDFKKSKADLM
GMRSQPRGNPHDTYEIYEWLGGFSEAEQGEHYSRIRLEEAQSQAERDVGHSSVRGMAPGY
RFTMQNCPRQDDNREYLIVSVSYALREGGYESGAAESHYSFSFAVQPTSYAFRPPRVTPM
TRTNGPQTATVVGRAGQEYWVDQYGRVKVQFRWDRYGKSDENSSCWVRVSSAWAGSNYGA
VNHPRKGQEVIVDFIGGHPDRPIIIGRVYNSDQMPPLELPAKVTVSGFVSRSQDGTPANA
NEFILDDAPGCELVRIHAEKDFELDVEADERDTIAGDRTTVIEGADDYTTNTSLTETING
PHTVTVNEGGPQNITVNGGPQNVKIKGGNQDVYVDGDQIIHVTGSRTDTVDSGETRTITG
GLTEDITGRQKTTISAAYEETSGTKNVSVSKGNENYWVSGDSVRIVGGASNLYSVGTVQV
DTVGGINLFANSGDVNITTPDQFNVHANVISLTSDHKDISYTNSLKTHAGSTITTIADLS
ITSMTPFANSLAWANSFTFAPLSETVNAASTNIGGASADIKAFRWSNRAFNQKQESQVSI
GPIYVDIKILVLFP
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgcccaacagagtcgtcaaagcccacacgccgctgggagaagaccagcttctgttccgc
tcgatgcacggcaccgaggggttgtcgcagctgttcgagttcgaggtcgacctgttgagc
ccgagcgtgtcgctcgacatgaagtcggtgctgggcaagccgctctcgctcgagatacag
acggcgggcgaacctcgtttcctgaatgggcagatcgttcgcttcacgatggtcggcaag
gaagggggctcgtcgcgctacgtgctgtaccgcgccactgtgcggccctggctctggtat
ctgacgcgcaccagcgactgcaagatcttccagaacaagtcggtcgtcgacatcctccag
gaagtgttcgccgactacaacttcgcgttcgagaagaagctcagcggaacctaccgccag
tgggagtactgcgtgcagtaccaggagaccgacttcgccttcgtgagccggttgatggag
catgaaggcatctactactacttcaagcacgagaagggcgagcacacgctggtgcttgcc
gacgacatcggcgcccacgaaaccctgccgggctatccgaagatcagctatcttgcggcc
gaccgcaacccggacccgttccaggaggtaatcgaccagtggcaggtgaccgaggaaatc
cgccccggcacctatgtggtggacgactacgatttcaagaagtcgaaggccgacctcatg
ggcatgcgcagccagccgcgcgggaatcctcacgacacctacgagatctacgaatggctg
ggcggcttcagcgaggccgagcagggcgagcactactcgcgcatccggctcgaagaggcg
caatcgcaggccgagcgcgacgtcggccactccagcgtgcgtggcatggcgccgggctac
cgcttcacgatgcagaactgcccgcggcaggacgacaaccgcgaatacctgatcgtgtcg
gtgtcctatgcgctgcgcgaaggcgggtatgagagcggtgcggccgaaagccactacagc
ttcagcttcgcggtgcagccgacctcgtacgcattccgtccgccgcgcgtcacgccgatg
acccggaccaacgggccgcagaccgcgacggtggtgggcagggcaggccaggagtactgg
gtcgaccaatacggccgcgtgaaggtgcagttccgctgggaccgctacggcaagagcgac
gagaacagctcatgctgggtgcgcgtttccagcgcctgggccggctcgaactacggcgcc
gtcaatcatccgcgcaagggccaggaagtgatcgtcgatttcatcggcggccatcccgac
cggcccatcatcatcggccgcgtctacaactccgaccagatgccgccgctggaactgccc
gcgaaggttaccgtgagcggcttcgtgagccgcagccaggacggcacgccggcgaatgcc
aacgagttcattctggacgatgcgccgggctgcgaactggtccggattcatgccgagaag
gatttcgagctcgatgtggaagcggacgagcgcgacaccatcgccggcgatcgcaccacg
gtgatcgagggcgccgacgactacaccaccaacacctcgctcaccgagacgatcaacggc
ccgcataccgtgacggtcaacgaggggggaccgcagaacatcaccgtcaatggcggtccg
cagaacgtcaagatcaaaggtggcaaccaagatgtctacgtcgatggcgaccagatcatt
cacgtgaccggcagtcgcacagacacggtggacagcggcgagacccggacgataactggt
ggtttgaccgaagatataacgggacgtcagaaaacgacgatttccgcagcatatgaagaa
acctcaggaaccaagaatgtttcggtcagcaagggaaacgaaaactattgggtgagtgga
gacagcgttcggattgttggaggcgcgtcaaatctgtattcggtcgggacggttcaggtc
gacaccgtcggcggcataaatctctttgcgaactcaggcgacgtcaacataacgacgccg
gatcagttcaacgtgcacgcgaacgtcatcagcctgacttcggaccacaaggacatcagt
tacacgaattcgctgaagacccatgccggcagcacgatcaccaccatcgcggacctgtcc
atcacgtcgatgacgccgtttgcaaattcgctggcttgggcgaattcatttaccttcgca
ccgctgtcggagaccgtcaacgcggcgagcaccaacatcggcggcgccagtgccgacatc
aaagccttccgctggtcgaaccgagctttcaaccaaaaacaggaatcccaggtctcgatc
ggtccaatctacgtggacatcaagattctggtgctctttccgtga

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