Variovorax paradoxus B4: VAPA_1c02430
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Entry
VAPA_1c02430 CDS
T02835
Name
(GenBank) putative type VI secretion system protein, FHA domain-containing
KO
K07169
FHA domain-containing protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
VAPA_1c02430
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Gene cluster
GFIT
Motif
Pfam:
T6SS_FHA_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-ProteinID:
AGU47373
UniProt:
T1X435
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Position
1:complement(255234..257159)
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AA seq
641 aa
AA seq
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MRWTVIEHAGKPVTAGPSALLAAPGGTIGRSPDNHLVLPDEQRQISRLQATVRFDDSGAT
VLRNMSAVLPIGVNERTLQHEQESPIADGDRVTIGSYVLVAGNGRRAVAVEPAAPLMAAA
PPPAAPVRNATPAGATAQAPMGSLLPAAPVSDVFSDLFGAGALPIGDTQPVTVAMPPPAV
PAAPPPAEAFAAAPVPAASRSPSPSPAPSPASTQPGAPQIPSAADWDAILANAPRREANA
SEPMPDPMAHEPFELPSQARRNPVDPLAELNPRAEDGMSDVALKRGMDPLSFFAADNDAP
SPLSDPRPTALTHEDPLSDVHPAVDLLARPAAPQGYSHSNHARELTAQFRPPNPVAFDAP
AVKANETQVSSAPEPPAPVPAPAPAPAPAPAASMPVTAGRADIAPPAKPAPPEPPAPEPK
PAAAAPSPVAAPAAPVAAPSSSDELFKAFLEGAGVPDVAGQQPLDAEAMRRLGRLMRAFT
DGTIELLSSRAMLKREVRAEITMIVDEENNPFKILPNGRAVLMQMFGARMPGFLSPEAAV
HDALGDLQSHQLGMVAGMRAALLTVLKRFDPTALNTATPHDGGLGEKLLPGGREARLWRQ
LQKLHAETTAAVEDDFQAVFGRAFQQAYDKEMERLKEARRA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggacggtgatcgaacatgccggcaagccggtgaccgcggggccctcggccttg
ctcgcggcacccggtggaaccatcgggcgcagccccgacaaccacctggtgctgcccgac
gaacagcgccagatctcgcgcctgcaggccaccgtgcgtttcgacgacagtggcgcgacg
gtgctgcgcaacatgagcgcggtgctgcccatcggcgtcaacgagcgcacgctgcagcac
gagcaggagtcgccgatcgccgatggcgaccgcgtgaccatcgggagctatgtgctggtg
gcggggaacgggcggcgcgccgtggccgtcgagcccgccgccccactgatggcggcagca
ccgccaccggccgcgcctgtgcgcaacgcaacgcccgccggcgccacggcgcaagcgccg
atgggctcgctgctgccggcggcacccgtctccgacgtgttctcggacctcttcggcgca
ggcgcattgccgatcggcgatacgcagcccgtgaccgtggcgatgccaccgccggccgtg
ccggcagcgccgccgcctgccgaagctttcgccgccgcgccggtgcctgcggcgtcgcga
tcgccatcgccatcgccagccccatcgccggcaagcactcagccgggcgccccgcagatt
ccttccgccgccgattgggatgccatcctcgcgaatgcgccgcgccgcgaggcgaacgcc
tccgagcccatgcccgacccgatggcgcacgagcctttcgagctgccgtcgcaggcgcgc
aggaatccggtcgatccgctggccgagctgaatccgcgtgcggaagacggcatgtccgac
gtggcgctgaagcgcggcatggacccgctgtctttctttgccgccgacaacgatgcgccc
tcgccgctttccgatccgcgccccaccgcgctgacccacgaagatccgctcagcgacgtg
catccggcagtcgatctgctggccaggccggccgccccgcagggatacagccattcgaac
catgcgcgggaattgacggcgcaattcaggccgccgaacccggtggccttcgatgcgccg
gctgtgaaggccaacgagacgcaggtgtcctcggcgcctgagccgccagcaccagtcccg
gcaccggcaccggcaccggcaccggcaccggcagcatcgatgccggtcaccgccggccgc
gcggacattgcaccgcctgcaaagcccgcgccgcctgaaccgcccgcaccagaaccgaag
cccgctgctgctgcgccgtcgccggtggccgcgccggcagcccctgtcgcagcgccctcc
tcttcggacgaactcttcaaggccttcctcgaaggcgcaggcgtgcccgacgttgccggc
cagcaaccgctggacgccgaagccatgcggcgcctcggccggctcatgcgcgcattcacc
gacggcaccatcgagctgctctcgtcgcgcgccatgctcaagcgcgaagtgcgtgccgag
atcacgatgatcgtcgacgaagagaacaaccccttcaagatccttcccaacggccgcgcc
gtgctgatgcagatgttcggcgcgcgcatgcccggcttcctgtcgcccgaggcggccgtg
cacgacgcactcggcgacctgcagtcgcatcagctcggcatggtggccggcatgcgcgcc
gcgctgctcactgtgctcaagcgcttcgaccccacggcattgaacaccgccacgccgcac
gacggcgggctgggcgagaagctgttgcccggcggccgcgaggcgcgcctgtggcgccag
ctgcagaagctgcatgccgagaccaccgcggccgtcgaggacgacttccaggccgtcttc
ggccgggccttccagcaggcctacgacaaggagatggaacggttgaaggaggcgcgccgt
gcttga
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