Variovorax paradoxus B4: VAPA_1c02800
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Entry
VAPA_1c02800 CDS
T02835
Symbol
glcD
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c02800 (glcD)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
VAPA_1c02800 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Histidinol_dh
ACCA
Motif
Other DBs
NCBI-ProteinID:
AGU47410
UniProt:
T1X5F6
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All DBs
Position
1:300216..301718
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AA seq
500 aa
AA seq
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MNAPLTAVQHDSLQKTDRQSQIVRALQAHLPAHALIWHAEDTTPYECDGLTAYRQRPLVV
ALPETEAQVAAVLKTCHQLGVPVVARGAGTGLSGGAMPHALGVTLSLAKFNRILKIDPVS
RTAVVECGVRNLAISEAAAPFNLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTLHNV
LRVRGFTAEGEPVEFGGEALDAPGLDLLALVIGSEGMLAVTTEVTVKLVPKPQLARCIMA
SFDDVRKAGDAVAAVIAAGIIPAGLEMMDKPMTAAVEDFVHAGYDLEAAAILLCESDGTA
EEVEEEIGRMTAVLRSSGATAIAVSTSEDERMKFWSGRKNAFPASGRISPDYMCLDSTIP
RKRLADILLAIQQMEKKYNLRCCNVFHAGDGNLHPLVLFDANDPDELHRCELFGADILET
SVAMGGTVSGEHGVGVEKLNSMCVQFTAAENEQMFGVKRAFDPAGLLNPGKAIPTLQRCA
EYGKQVVRGGRLPHPDLPRF
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgctcaccgccgtccagcacgattcgctgcagaaaaccgaccgccagtcg
cagatcgtgcgcgccctgcaggcccacctgccggcgcacgcgctcatctggcatgccgag
gacaccacgccctacgagtgcgacggcctcaccgcctaccggcagcgtccgctggtggtg
gccctgcccgagaccgaggcgcaggtggcggcggtgctcaagacctgccaccagctcggc
gtgcccgtggtggcgcgcggcgcgggcaccgggctctcgggcggcgccatgccgcatgcg
ctgggcgtgacgctgtcgctcgccaagttcaaccgcatcctgaagatcgacccggtgagc
cgcacggccgtggtggagtgcggcgtgcgcaacctcgccatcagcgaagccgccgcgcct
ttcaatctctactacgcgcccgatccgtcgagccagatcgcctgcaccatcggcggcaac
gtggccgagaactcgggcggtgtgcactgcctgaaatacggcctcacgctgcacaacgtg
ctgcgcgtgcgcggcttcacggcggaaggcgagcccgtcgagttcggcggcgaggcgctc
gacgcgccgggcctggacctgctcgcgctggtcatcggcagcgaaggcatgctggccgtg
accaccgaggtcaccgtcaagctggtgcccaagccgcagctcgcacgctgcatcatggcc
agcttcgacgacgtgcgcaaagccggcgatgcggtggccgcggtgattgcggccggcatc
atccccgcggggctcgagatgatggacaagccgatgaccgccgccgtcgaagacttcgtg
catgcgggctacgacctcgaagccgccgccattcttctgtgcgaatccgacggcaccgcc
gaagaggtggaagaggaaatcggccgcatgacggccgtgctgcgctcctccggcgccacc
gccatcgcggtcagcaccagcgaagacgaacgcatgaagttctggagcggccgcaagaac
gcgttcccggcgtcgggccgcatcagccccgactacatgtgcctcgattcgaccattccg
cgcaagcggctggccgacatcctgctggccatccagcagatggagaagaagtacaacctg
cgctgctgcaacgtgttccacgcgggcgacggcaacctgcatccgctggtgctgttcgat
gccaacgaccccgacgagctgcaccgctgcgagctcttcggcgccgacatcctcgagacc
agcgtggccatgggcggcaccgtgtcgggcgagcatggcgtgggcgtggaaaagctcaac
agcatgtgcgtgcagttcaccgcggccgagaacgagcagatgttcggcgtcaagcgggcc
ttcgatccggcggggctgctgaaccccggcaaggcgattcccacgctgcagcgctgtgcc
gaatacggcaagcaggtggtgcgcggcggcaggctgccgcatcccgacctgccgcgcttc
tga
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