Variovorax paradoxus B4: VAPA_1c02870
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Entry
VAPA_1c02870 CDS
T02835
Symbol
alr
Name
(GenBank) alanine racemase Alr
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00470
D-Amino acid metabolism
vpd01100
Metabolic pathways
vpd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VAPA_1c02870 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VAPA_1c02870 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
VAPA_1c02870 (alr)
Enzymes [BR:
vpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
VAPA_1c02870 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
Precursor biosynthesis
Racemase
VAPA_1c02870 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AGU47417
UniProt:
T1X3C1
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All DBs
Position
1:307640..308740
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AA seq
366 aa
AA seq
DB search
MPRPILATVHTAALRHNLDRARRAAVDARVWAVVKANAYGHGIERVYEGLRGADGFALLD
LAEAERVRALGWRGPVLLLEGVFEARDLELCSRLDLWHAVHCDEQIDMLAAHKTLKPQRV
FLKMNSGMNRLGFTPERFGSAWTRLNALPQVDEISLMTHFSDADGARGIAHQLEVFDRVT
HDLPGERSIANSAATLRHARQTRGDWVRPGIVLYGSAPDFPEHDAAHWQLQPTMTLSTKL
IGVQTLKAGDTIGYGSNFTADGPLTIGVAAVGYADGYPRHCNTGTPVLVNGVRTRMVGRV
SMDMITVDLTPVPDAKFGTEVTLWGRSAVTGAVLPIDEVAQAAGTVGYELMCAVAPRVPF
APADDE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccccattctcgccactgtccacaccgccgcgcttcgccacaacctcgaccgg
gcacggcgtgccgctgtcgatgcccgcgtctgggccgtggtcaaggccaatgcctatggg
catggcatcgagcgggtctatgagggcctgcgcggcgctgacggctttgcgctgctcgac
ctggccgaagccgaacgcgtgcgcgccctcggctggcgcggcccggtgctgctgctcgaa
ggcgtgttcgaggcgcgcgacctggagttgtgctcgcggctcgatctctggcacgcggtg
cactgcgacgagcagatcgacatgctcgcggcccacaagacactcaagccgcagcgcgtg
ttcctcaagatgaattccggcatgaaccgcttgggcttcacgcccgagcgtttcggctcg
gcctggacgcgcctgaacgcgttgccgcaggtcgacgagatctcgctgatgacgcatttc
agcgacgccgatggcgcgcgcggcatcgcgcaccagctggaagtgttcgaccgcgtcacc
cacgacctgccgggcgaacgctccatcgccaacagcgccgcaaccctgcgccacgcccgg
cagacccgcggcgactgggtacgcccgggcatcgtgctgtacggcagcgcgcccgacttt
cccgagcacgacgcggcgcactggcagctccagcccaccatgacgctgtcgaccaaactg
atcggggtgcagacgctgaaggccggcgacaccatcggctacggctccaacttcacggcc
gacgggccgctcaccatcggcgtggcggcggtcggctatgccgacggctatccgcgccac
tgcaacaccggcacgcccgtgctggtgaacggcgttcgcacccgcatggtgggccgcgtg
agcatggacatgatcaccgtcgacctcacgcccgtgcccgacgcgaagttcggcaccgag
gtcacgctgtggggccgctcggccgtgaccggcgcggtgctgcccatcgacgaggtcgcg
caggcggccggcacggtcggctacgagctcatgtgcgcggtggcgccgcgcgtgcccttc
gctcccgccgacgacgaatga
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