KEGG   Variovorax paradoxus B4: VAPA_1c03040
Entry
VAPA_1c03040      CDS       T02835                                 
Name
(GenBank) type VI secretion system protein, Vgr family
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c03040
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c03040
Secretion system [BR:vpd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VAPA_1c03040
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 Gp44-like_2nd
Other DBs
NCBI-ProteinID: AGU47434
UniProt: T1X516
LinkDB
Position
1:complement(326761..329145)
AA seq 794 aa
MSAFNRGRKLAATSSAMPTFAGMDALEPMRLEGEEALSRPYSYTITLTTPESPDIDARSA
ANVKLKPLIGEEFSVHVLLDGRTGGAGQERHISGLVTRARFLRLESRRALYEVVIEPWLS
LAQRTRDFRIFQNNSVLDTVGEVLGAYGFALSVRATGSYPAREFVVQYGETDYDFVSRLL
HEWGLYYYFEHDESSHTMVIVDDMQSHRPFPAGGYEQVPFSAMQASSNEEHCHRFRLAEG
LQSGKWVTGDFDFTRPKADLTQTRAMPRRTQHSTREVFAWPGNYAVESEGEQLARARMEE
AGAPGQVASGAGNLRGVAAGHRFTLVDHPQDSANADYLVTAARLSLQEAGDTTGQEEFQC
NVEFEVIPASNVFRATPDATKPRTTGPQTAVVTGPAGREIWTDQYGRVKLGFHWNRYCTK
DESSSCWVRVSSPWAGTNFGGMQIPRIGQEVVVDFEYGDPDRPIITGRVYNADNMPPWEL
PANATQSGLLSRSSEGGTGENANALRFEDKKGEEQLWLHAEKDQLIEVENDEMHTVGRDR
TKTVDHDETNHIKNDRTETVDRNETITVHGKRAETVDGDETVTVKSNRSHSVTGTEALTV
TGDQTHTAQANRTASVSGNQNTSVTGTDSLTVTQARTVTAQDTDSWNVALGQTTTIGQAY
QVSAKSHIGTYNDAMALNVPAGPASATSQGDLSLTSSAANIYGTAALNMGLFAQGGDFSA
VASTNVGVSAEGGTLDAFSSGAMTHASPTSVVLDVEGTTVEVTPGRIVLRAGSATLMLDD
AGVTVNGTKIFLNC
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgtccgccttcaaccgcggccgcaagctcgccgcaacttccagcgccatgcccacgttc
gcaggcatggatgcacttgaaccgatgcggttggagggggaagaagccctcagccgtcct
tacagctacaccatcacgctgaccacgccggagtcgccggacatcgacgcgcgctcggcg
gcgaacgtcaagctcaagcccctgatcggcgaggagttcagcgtgcacgtcctgctcgac
ggacgcactggcggggcggggcaggagcgccacatctccggcctggtgacacgcgcccgc
ttcctgcgcctggagagcaggcgcgcgctctacgaggtcgtcatcgagccctggctgagc
ctggcgcagcgaacgcgggatttcaggatcttccagaacaacagcgtgctcgacacggtc
ggcgaagtgctcggcgcgtacggctttgcgctttcggtccgggccacgggcagctatccc
gcgcgcgagttcgtggtccagtacggcgagacggactacgacttcgtcagccgtctgctg
cacgagtggggcctgtactactacttcgagcatgacgagtccagccacacgatggtgatc
gtcgacgacatgcagtcgcaccggcccttcccggcaggcggctacgagcaggttcctttc
agtgccatgcaggcatcgtccaacgaggagcattgccatcgtttccggctggccgaaggc
ctgcaaagcggcaagtgggtcacgggcgacttcgacttcacgcgaccgaaggcggacctc
acgcagacccgggccatgccgcggcgcacgcagcacagcacgcgggaagtgttcgcgtgg
cccgggaactacgccgtggaatccgagggcgaacagctcgcacgtgcacgcatggaagaa
gccggcgcgccggggcaggtcgccagcggcgcgggcaacctgcggggcgtggcggccggc
catcgcttcacgctggtcgatcatccgcaggacagcgcgaacgccgactacctcgtcacc
gcggcacgcctgtccctgcaggaggcgggcgacacgacggggcaggaagagttccagtgc
aacgtcgagttcgaggtcatcccggcgagcaacgtcttccgcgcgaccccggacgcgacc
aagccgcgcaccaccgggccgcagaccgcggtggtcaccggccccgcgggccgcgagatc
tggaccgaccagtacgggcgcgtgaagctcggctttcactggaaccgctactgcaccaag
gacgaaagcagctcgtgctgggtccgggtgtcctcgccgtgggccggcaccaacttcggg
ggcatgcagattccgcgcatcggccaggaggtggtggtcgacttcgagtacggcgacccg
gaccggccgatcatcaccggccgcgtctacaacgcggacaacatgccgccgtgggagctg
ccggcaaatgccacgcaaagcggcctgctgtcgcgcagctccgaaggcgggaccggcgag
aacgcgaatgcccttcgcttcgaggacaagaagggcgaagagcaactctggctgcatgcg
gagaaggaccagctgatcgaggtcgagaacgacgagatgcacacggtgggccgcgaccgc
accaagaccgtcgaccacgacgaaaccaatcacatcaagaacgaccgcacggaaaccgtc
gaccgcaacgagacgatcacggtccacggcaagcgagccgagacggtggacggcgacgag
acggtcaccgtcaagtccaaccgcagccactcggtcaccggcaccgaggccctcactgtc
acgggcgaccagacccacaccgcccaggccaaccgcaccgccagcgtcagcggcaaccag
aacacgtcggtcacgggcacggattcgctgacggtgacgcaggcccgcaccgtcacggcc
caggacaccgacagctggaacgtcgccctcgggcagaccaccaccatcggccaggcctac
caggtttccgccaagtcgcacatcggcacgtacaacgacgcgatggcgctgaacgtgccg
gccggcccggcctcggccacttcgcaaggcgacctctccctgaccagctcggccgccaac
atctatggaacggccgccctcaacatgggcctgttcgcgcaaggcggggacttctccgcc
gtggcctcgaccaacgtcggcgtgagcgccgagggcggcacgctggacgctttttcctcc
ggcgccatgacgcacgcgagcccgaccagcgtggtgctcgacgtcgagggcacgacggtg
gaggtcacgcccgggcgcatcgtgctgcgcgccggcagcgcgaccctgatgctggacgac
gccggcgtcacggtcaacggcaccaagatcttcctgaactgctga

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