Variovorax paradoxus B4: VAPA_1c03100
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Entry
VAPA_1c03100 CDS
T02835
Symbol
rdgC
Name
(GenBank) putative recombination-associated protein RdgC
KO
K03554
recombination associated protein RdgC
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c03100 (rdgC)
DNA repair and recombination proteins [BR:
vpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VAPA_1c03100 (rdgC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AGU47440
UniProt:
T1X5I5
LinkDB
All DBs
Position
1:complement(335178..336179)
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AA seq
333 aa
AA seq
DB search
MSVFKNVIVYRIEPAWSQTLAEAEEALAKARFEPCGPSQEKSAGWVEPRGEANGPLVESI
DGQWLVEYMIESKAVPGSVVRRKLDERCAQIEATTGRKPGKKEKKELKEDITLELLPMAF
TRSARVAVWIDKAENRLVINSGNAARADEVVTSLVKSLDGFAVALINTQVEPAAAMANWL
LTQEPPAGFTIDRECELKASDDSKAVVRYAKHPLDIEEVQKHITDGKRPTRLALTWDDRV
SFELTHGMLIRKIVFLEGTGDGAAGGKKEDNFDADVAIATGELGQLVPALLDALGGEAAF
SAALPDEAPKPAAAAAPTTTVPADAPEEEDAPF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtattcaagaacgtcatcgtctatcgcatcgaacctgcctggtcccaaacattg
gccgaggcagaagaagcgctcgccaaggcgcgcttcgagccctgcggcccctcgcaggaa
aaatccgccggctgggtcgaaccccgcggcgaagccaacggcccgctggtcgaatccatc
gacggccagtggctggtcgaatacatgatcgagagcaaggcggtccccggttccgtggtg
cgccgcaagctcgacgagcgctgcgcccagatcgaagccaccaccggccgcaagcccggc
aagaaggaaaagaaggagctcaaggaggacatcaccctggagctgctgccgatggccttc
acgcgcagcgcccgcgtggccgtgtggatcgacaaggccgagaaccgcctcgtgatcaac
agcggcaacgccgcgcgcgccgacgaagtggtcaccagcctcgtgaagtcgctcgacggc
tttgcggtggcgctgatcaacacgcaggtggagccggccgccgccatggccaactggctc
ctgacgcaggagccgccggccggcttcaccatcgaccgcgagtgcgagctcaaggcctcc
gacgactccaaggccgtggtgcgctacgccaagcacccgctcgacatcgaggaagtgcaa
aagcacatcaccgacggcaagcgccccacgcgcctggcgctcacctgggacgaccgcgtg
tccttcgagctgacgcacggcatgctgatccgcaagatcgtgttcctggaaggcacgggc
gacggcgcggccggcggcaagaaggaagacaacttcgacgccgacgtggcgattgccacc
ggcgaactcggccagctggtaccggcgctgctcgacgcgctgggcggcgaggctgcgttc
tcggcggcgttgcccgacgaagcgccgaagccggctgcggcagccgctcccacgacgacg
gtgccggccgatgcgcccgaggaagaagacgcgccgttctga
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