Variovorax paradoxus B4: VAPA_1c03430
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Entry
VAPA_1c03430 CDS
T02835
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00970
Aminoacyl-tRNA biosynthesis
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAPA_1c03430 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpd03029
]
VAPA_1c03430 (gatB)
Enzymes [BR:
vpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
VAPA_1c03430 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
VAPA_1c03430 (gatB)
Mitochondrial biogenesis [BR:
vpd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
VAPA_1c03430 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Latarcin
Motif
Other DBs
NCBI-ProteinID:
AGU47473
UniProt:
T1X4E3
LinkDB
All DBs
Position
1:complement(368247..369677)
Genome browser
AA seq
476 aa
AA seq
DB search
MRGYEVIIGFETHAQLSTASKIFSRASTAFGAEPNTQACAVDLALPGTLPVMNKGAVERA
IKLGLALGSHIAPRSVFARKNYFYPDLPKGYQISQYEIPVVQGGSVSFFLGEEKKTVRLV
RAHLEEDAGKSLHENFIGQSGIDLNRAGTPLLEIVTEPDMRSTAEAVAYARELHKIVTWI
GICDGNMQEGSFRCDANVSVRKPGEKLGTRREIKNLNSFKFMQQAIDYEINSQINELEDG
RKIEQATVLFDPDTGETRTMRTKEDAADYRYFPDPDLPPLAIEPEWIERVRATMPELPRA
MAERYVRDHGMSEYDAAQLTQSPALARYFDDAVKAGATPKLASNWITGEMARRLNAQEIG
IEAAPVTAQQLAQLVGRIADGTLPNNAARQVFDALWTGEGSDVDAIIEAKDLKPMSDTGA
LDKILDEVIAKNAKNVEEYRGGKEKALNGLVGQVMKASGGKANPAQVTELLKAKLG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggctatgaagtcatcatcggcttcgagacgcacgcgcaactctcgaccgcgagc
aagatcttcagccgcgcctccaccgccttcggcgccgagcccaacacgcaggcctgcgcg
gtcgacctggcgctgcccggcacgctgccggtgatgaacaagggcgccgtcgagcgtgcc
atcaagctgggcctcgcgctcggctcgcacattgcgccgcgcagcgtgttcgcgcgcaag
aactacttctatcccgacctgcccaagggctaccagatcagccagtacgagatcccggtc
gtgcagggcggctccgtctcgttcttcctgggcgaagaaaagaagaccgtgcgcctggtg
cgcgcccacctcgaggaagacgcgggcaagtcgctgcacgagaacttcatcggccagagc
ggcatcgacctgaaccgcgccggcacgccgctcctggagatcgtgaccgagcccgacatg
cgctccaccgccgaggccgtggcctatgcgcgcgagctgcacaagatcgtcacctggatc
ggcatctgcgacggcaacatgcaggaagggagctttcgctgcgacgccaacgtctcggtg
cgcaagcccggcgaaaagctcggcacgcggcgcgagatcaagaacctgaacagcttcaag
ttcatgcagcaagccatcgactacgagatcaactcgcagatcaacgagctggaagacggc
cgcaagatcgagcaggccaccgtgctgttcgaccccgataccggcgagacgcgcaccatg
cgcaccaaggaagacgcagccgactaccgctacttccccgaccccgacctgccgccgctc
gccatcgaacccgaatggatcgagcgcgtgcgcgccaccatgcccgagctgccgcgcgcc
atggccgagcgctacgtgcgcgaccacggcatgtcggaatacgacgcggcacagctcacg
cagagccccgcgctcgcacgctatttcgacgacgcggtgaaggccggcgcaacgcccaag
ctcgccagcaactggatcaccggcgaaatggcgcgccgcctgaacgcgcaggagatcggc
atcgaggccgcgccggtgacggcgcagcagctggcgcagctggtcgggcgcattgccgac
ggcacgctgcccaacaacgccgcgcgccaggtgttcgacgcgctctggaccggggaaggc
agcgatgtcgacgcgatcatcgaagccaaggacctgaagcccatgagcgacaccggcgcg
ctcgacaagatcctggacgaagtgatcgcgaagaacgcgaagaacgtcgaggaataccgc
ggcggcaaggaaaaggccctcaacggcctcgtgggccaggtgatgaaggccagcggcggc
aaggcgaaccccgcgcaggtgaccgaactgctcaaggcaaaactgggctga
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