Variovorax paradoxus B4: VAPA_1c03730
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Entry
VAPA_1c03730 CDS
T02835
Symbol
potA1
Name
(GenBank) putative spermidine/putrescine ABC transporter, ATP-binding protein PotA
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c03730 (potA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c03730 (potA1)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
VAPA_1c03730 (potA1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
Rad17
SMC_N
AAA_22
AAA_25
AAA_30
nSTAND3
AAA
nSTAND1
NACHT
AAA_16
ABC_ATPase
PhoH
AAA_28
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AGU47503
UniProt:
T1X4H6
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All DBs
Position
1:complement(398039..399109)
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AA seq
356 aa
AA seq
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MSFLRLTDVTKFYGATRAVSAMNLTVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGRI
ELAGKDITHAKANTRGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKSERAERVKQALAL
VHLEAHATRYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQ
RKVGTTTVMVTHDQSEAMSISDRVVVMEGGCATQIDHPHRVYEHPSTRFISTFVGKANLL
NGRVTASGARSCHVAVGALAVEVDDTAYMPGDAVLMSVRPEKLQLVEAGRGRLDGQVLER
FFLGSQWLYRLGTPAGDLMVLSPNDGRDALDEGHAAGIDWPAHCTRLLPADEAVVA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcctacggctcaccgacgtgaccaagttctatggcgccacgcgcgccgtgtcg
gccatgaacctcacggtggagaagggcgagttcgtctcgctgctcggcccctcgggctgc
ggcaagaccacgacgctgcagatgattgcgggcttcgaggcggtgtcgagcgggcgtatc
gagctggcgggcaaggacatcacgcatgccaaggccaacacgcgcggcctgggcatcgtg
ttccagacctatgcgctgttcccgcacatgacggtggccgacaacgtgagcttcggcctc
gagatgcgaaagatgccgaagtccgaacgtgccgagcgcgtcaagcaggcgctggcgctg
gtgcatctggaagcacacgccacgcgctacccgcgcgagctctcgggcgggcagcgccag
cgcgtggcactggcccgcgcactcgtgatcgagccgccggtgctgctgctggacgaaccg
ctgtccaacctcgatgccaagctgcgcgaagagatgcagttcgagctgcgacagattcag
cgcaaggtcggcaccaccacggtgatggtcacgcacgaccagagcgaggccatgtcgatc
agcgaccgcgtggtggtgatggaaggcggctgcgccacgcagatcgaccatccgcaccgc
gtgtacgagcatccgagcacgcgcttcatttccaccttcgtgggcaaggccaacctgctg
aacgggcgcgtcacggccagcggcgcgcgcagctgccatgtggcggtgggcgccctcgcg
gtcgaggtcgacgacaccgcctacatgccgggcgatgcggtgctgatgagcgttcgcccg
gaaaaactgcagctggtggaggccggccgcggccgcctcgacggccaggtcctggagcgc
ttcttcctcggcagccaatggctctatcgcctgggcacgcccgccggcgatctgatggtg
ctgagccccaacgacggccgcgacgcgctcgacgaaggccatgccgccggcatcgactgg
cccgcgcattgcacgcggctgctgccggccgacgaggcggtggtggcatga
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