Variovorax paradoxus B4: VAPA_1c03890
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Entry
VAPA_1c03890 CDS
T02835
Name
(GenBank) putative acyl-CoA dehydrogenase
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00071
Fatty acid degradation
vpd00280
Valine, leucine and isoleucine degradation
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01212
Fatty acid metabolism
Module
vpd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
vpd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
VAPA_1c03890
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VAPA_1c03890
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
VAPA_1c03890
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Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
AGU47519
UniProt:
T1X594
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All DBs
Position
1:complement(414518..415681)
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AA seq
387 aa
AA seq
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MDAELRADRAALADTVRRFAESEIAPHVQAWDDLGEFPRALYTRAAELGLLGLGYPEALG
GTPASHALKLPAWIALARHGRSGGVLASLFSHNIGLPPVVLHASDAVRSEVVPPVLRGEK
IAALAITEPGGGSDVAALRTTARRDGEHYVVNGEKTFITSGMRADWITVAVRTGEERGAG
GISMLLVPGDAAGLTRTRLAKMGWWCSDTAQLHFDNVRVPARYLLGEEGAGFRMVMGNFN
GERIGLAAGALGFAQACLDEALAWSRERKTFGAALIEHQAVRHKLVDMQMRIASTEAWLE
AVSAEGDAHEAAGRFNAPEWVAQVCMLKNHATQTMQFCADQAVQILGGMGFMRGTVSERI
YREVKVMMIGGGAEEIMKELAARQMGW
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaacttcgagccgaccgcgcggcgctcgccgacacggtgcggcgctttgcc
gaaagcgagatcgcgccgcatgtgcaggcctgggatgacctgggcgaatttccccgcgcg
ctctatacgcgcgcggcagagttgggcctgctcggcctcggctaccccgaggcattgggc
ggcacgccggcctcgcatgcgctcaagctcccggcatggatcgcgctcgcgcgccatggc
aggagcggcggcgtgctcgcgagcctgttctcgcacaacatcggcctgccaccggtggtg
ctgcatgcgagcgacgcggtgcgcagcgaagtcgtgccgcccgtgctgcgcggcgagaag
atcgccgcgcttgccatcaccgagcccggcggcggctccgacgtggcggcactgcgcacc
acggcaaggcgcgacggcgagcactacgtggtgaacggcgaaaagaccttcatcacctcg
ggcatgcgcgccgactggatcacggtggcggtgcgcacgggcgaggagcgcggtgccgga
ggcatctcgatgctgctggtaccgggcgatgcggccggcctcacgcgcacgcggctcgcc
aagatgggctggtggtgctccgacaccgcacagcttcacttcgacaacgtgcgcgtgccc
gcgcgctacctgctcggcgaagaaggcgcgggtttccgcatggtcatgggcaatttcaac
ggcgaacgcatcggcctggctgcgggcgcgctcggcttcgcgcaggcctgcctcgacgag
gcactggcatggtcgcgcgagcgcaagaccttcggcgccgcactcatcgaacaccaggcg
gtgcgccacaagctggtggacatgcagatgcgcatcgcctccaccgaggcgtggctcgag
gccgtgtccgcagaaggcgatgcacacgaggcggccggccgtttcaacgcacccgaatgg
gtcgctcaggtctgcatgctcaagaaccacgccacgcagaccatgcagttctgcgccgac
caggcggtgcagatcctgggcggcatgggcttcatgcgcgggacggtgagcgagcgcatc
taccgcgaggtgaaggtgatgatgatcggcggcggcgccgaggagatcatgaaggagctg
gcggcccggcagatgggctggtaa
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