Variovorax paradoxus B4: VAPA_1c04080
Help
Entry
VAPA_1c04080 CDS
T02835
Symbol
rbsC1
Name
(GenBank) putative ribose ABC transporter, permease protein RbsC
KO
K10440
ribose transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c04080 (rbsC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c04080 (rbsC1)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VAPA_1c04080 (rbsC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AGU47538
UniProt:
T1X4K6
LinkDB
All DBs
Position
1:complement(438717..439697)
Genome browser
AA seq
326 aa
AA seq
DB search
MNATATHPTPPAPDGGLFTQLRRSTAFLPLVGLVAISVFMIVATDNFLSWGNVQNIALQS
SINAIIAVGMTAAILTGGIDLSVGAVVALSGTLASGMMVQFGLPPMLAVPLGLAVGVVIG
LFNGYCVAYLRMPPIIVTLATMGIARGIALIYTGGYPIDGLPDSFAFLGGGVLAGIKVPI
LIMLATYLVAYVLLNMAPFGRYVYAIGGNEEATRLSGVRVSRYKLLVYALSGFTAAVAGI
VQAARVTSGQPGVGVGFELDAIAAVVMGGTSIAGGRGAIVGTLVGALLLGVLNNGLNMIG
VSPYLQLIIKGGIVLLAIFISREAKR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaccgccacccacccgacaccgccggcgcctgatggaggactcttcacccag
ctgcgccgctccacggcctttcttccactggtaggactggtagcgatttcggtcttcatg
atcgtcgcgaccgacaactttctctcgtggggcaacgtgcagaacatcgcgctgcagtcg
tcgatcaacgccatcatcgcggtcggcatgacggccgcgatcctcaccggcggcatcgat
ctctcggtcggcgcggtggtggcactgtccggcacgctggcctcgggaatgatggtgcag
ttcgggctgccgcccatgctcgccgtgccgctgggcctggccgtcggcgtcgtgatcggc
ctcttcaacggctactgcgtcgcctacctgcgcatgccaccgatcatcgtgacgctggcc
acgatgggcatcgcgcgcggcattgcgctgatctataccggcggctatccgatcgatgga
ctgcccgactcgttcgccttcctcggcggcggcgtgctcgcgggcatcaaggtgccgatc
ctcatcatgctggcgacctacctcgtggcgtacgtgctgctcaacatggcgcccttcggc
cgctacgtgtatgccatcggcggcaacgaggaggcgacgcggctctcgggcgtgcgcgtg
tcgcgctacaaactgctggtgtatgcgctgagcggcttcaccgccgccgtcgcgggcatc
gtgcaggcggcgcgcgtgaccagcggccagcccggcgtgggcgtgggcttcgagctcgat
gcgatcgcggcggtggtgatgggcggaacgtcgattgccggagggcgcggcgcgatcgtc
ggcacgctggtcggtgcgctgctgctgggcgtgctgaacaacgggctcaacatgatcggc
gtgtcgccgtacctgcaattgatcatcaagggcgggatcgtcttgctcgccatcttcatc
agccgcgaagccaagagatga
DBGET
integrated database retrieval system
