Variovorax paradoxus B4: VAPA_1c04260
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Entry
VAPA_1c04260 CDS
T02835
Name
(GenBank) transcriptional regulator, GntR family
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c04260
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VAPA_1c04260
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GFIT
Motif
Pfam:
FCD
GntR
HTH_11
Fe_dep_repress
DUF7059
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGU47556
UniProt:
T1X545
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Position
1:complement(456715..457431)
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AA seq
238 aa
AA seq
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MDTLSQQVTETLRAWILHGRLAPGMRVEEVPIAESLKVSRTPVRTALAALAMEGLIDHQP
KKGYLVRSFALEDILAAYEVRSVLEGLACRRFAALGVDEPTAALLHECLREGDEILAKGK
LLVEDLAPYQQMNVRLHNALMQGARNPWVMRFGAQAQAVPFASDRIMLWNDHGVILRSHD
DHHRIVHAVISGDAARAEQLMREHVYYAGILLRDNYQRLLDERSRDGASGPLTAETPP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggacacactctctcaacaagtcaccgagacgctgcgcgcctggatccttcacgggcgg
cttgcgcccggcatgcgcgtggaggaagtgcccatcgcggaaagcctcaaggtgtcgcgc
acgccagtgcgcaccgcgctggccgcgctggcaatggaggggctgatcgatcaccagccg
aagaagggttacctcgtgcgctcgttcgcgctcgaggacatcctggcggcctacgaggtg
cgctcggtgctcgaggggctggcctgccggcgctttgccgcgctcggcgtggacgagccg
accgccgcgctactgcacgaatgcctgcgcgaaggcgacgaaatacttgcgaagggcaag
ctgctggtggaagacctcgcgccctatcagcagatgaacgtgcgactgcacaacgcgctg
atgcagggcgcccgcaatccgtgggtgatgcgcttcggcgcgcaggcgcaggcggtgccc
ttcgcgtcggaccggatcatgctgtggaacgaccacggcgtgatcctgcgttcgcacgac
gaccaccaccgcatcgtgcatgcggtgatttcgggcgacgcggcacgcgcggagcaattg
atgcgcgagcatgtgtactacgcgggcatcctgctgcgcgacaactaccagcggctgctc
gacgagcgcagccgcgacggcgcctcgggaccgctgaccgccgaaacgccgccatag
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