Variovorax paradoxus B4: VAPA_1c04280
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Entry
VAPA_1c04280 CDS
T02835
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c04280
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c04280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c04280
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AGU47558
UniProt:
T1X4M8
LinkDB
All DBs
Position
1:458400..459614
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AA seq
404 aa
AA seq
DB search
MKKNLLSALATSAALCALVPAAFAQSEPGLTDKTIKIGMFSPMSGASMNYGFDVINAARM
YYDKVNKEGGVNGRKIELVVEDDRCNANDLLAAVKKLTEQDQVFLLNGGSCSAAVVGARE
YVERAKIPLVMLNASGDGALYPPSRYIYGAFSISQHAVGGSMVQFASEQLKAKKIGYINH
DDAYGGWNLESAQAQAKALGGVDLQVQSVNPNITDVTAPMLKIKAANPDVLLLTTYARPV
SLIVKRAFELGFNKPIVLAVNSTADLKQLVENVGNKDAFKNVYIQEVLADLPGGPKLKWV
YDMYKAAYPDLASKPGYPQTYMPYGIPSAMAVVNALKAAGPNPTREKVLAALSTMKFDSG
VMAGPIEFGPDDRAAQEAAIYIKFDGSNMALVPGSYKSVWKYKP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacctgctttcggccctggccaccagcgcggcactgtgcgcgctggtgccc
gccgcgttcgcgcagtccgaacccggcctcaccgacaagaccatcaagatcggcatgttc
tcgccgatgtcgggcgcgtcgatgaactacggcttcgacgtgatcaacgccgccaggatg
tactacgacaaggtcaacaaggaaggcggtgtgaacggccgcaagatcgagctcgtggtg
gaggacgaccgctgcaacgccaacgacctgctggccgcggtgaagaagctcaccgagcag
gaccaggtgttcctgctcaacggcggctcgtgctccgcggccgtggtgggcgcgcgcgaa
tacgtcgagcgcgcgaagatcccgctcgtgatgctcaacgcctcgggcgacggggcgctg
tatccgccgtcgaggtacatctacggcgcgttctcgatctcgcagcacgccgtgggcggc
tccatggtgcagttcgcgagcgagcagctcaaggcgaagaagatcggctacatcaaccac
gacgacgcctacggcggctggaacctcgaatcggcccaggcgcaggccaaggcgctcggc
ggcgtcgacctgcaggtgcagtcggtcaatccgaacatcaccgacgtcacggcgcccatg
ctcaagatcaaggctgccaaccccgacgtgctgctgctcacgacctatgcgcgacccgtg
agcctgattgtcaagcgcgctttcgaactgggcttcaacaagcccatcgtgctggccgtc
aactccaccgccgacctgaagcaactggtggagaacgtgggcaacaaggacgccttcaag
aacgtctacatccaggaagtgctggccgaccttcccggcggccccaagctcaagtgggtg
tacgacatgtacaaggccgcctacccagacctggcctcgaaacccggctacccgcagacc
tacatgccctacggcattccatcggcgatggcggtggtcaacgctctgaaggccgcgggc
ccgaaccccacgcgcgagaaggtgctggcggcgctctcgacgatgaagttcgactccggc
gtgatggccggcccgatcgaattcggcccggacgaccgcgcggcgcaggaggcggcgatc
tacatcaagttcgacggcagcaacatggcgctggtgccgggcagctacaagagcgtgtgg
aagtacaagccctga
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