Variovorax paradoxus B4: VAPA_1c04410
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Entry
VAPA_1c04410 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c04410
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c04410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c04410
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
AAA_23
AAA_30
AAA_27
SMC_N
AAA_15
RsgA_GTPase
AAA_16
AAA_25
AAA_13
AAA_22
AAA
TsaE
MMR_HSR1
AAA_28
AAA_33
DO-GTPase2
SRP54
AAA_14
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AGU47571
UniProt:
T1X566
LinkDB
All DBs
Position
1:complement(470759..471514)
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AA seq
251 aa
AA seq
DB search
MSLFRIEGLVKRFGGLLATDHVNLTVERGEVHALIGPNGAGKTTLVNLITGLLKADAGRI
LLDEKDITGFKDHQRVAAGMSRCFQVTRVFAKETVHDNLMLAAQAHAGSSLRFMAPRATE
RGLVERAVALADRVGLGSERHRIAGTLPHGAQRALDVALALAAEPKLLLLDEPMAGMGPD
ESARMVDLIESLRESMAILLIEHDMDAVFRLADRLTVLVQGRVLMSGTADEVRGHPDVQA
VYLGTEAEGHA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttcaggatcgaagggttggtcaagcgcttcggcggcttgctcgcaaccgac
catgtgaacctcaccgtggagcgcggcgaagtgcatgcgctgatcgggccgaacggcgcg
ggcaagaccacgctggtcaacctgatcaccgggctgctcaaggccgatgccgggcgcatc
ctgctcgacgagaaggacatcaccggcttcaaggaccaccagcgcgtggcagccggcatg
tcgcgctgcttccaggtgacgcgcgtgttcgccaaggaaacggtgcacgacaacctcatg
ctcgcggcgcaggcccatgcgggcagcagcctgcgcttcatggcaccacgcgcgacggaa
cgcggcctggtggaacgcgccgtggcgctggccgaccgcgtgggcctcggcagcgaacgc
caccgcatcgcgggcacgctaccgcacggcgcgcagcgcgcgctcgacgtggcgctggcg
ctcgcggccgaacccaagctgctgctgctcgacgagccgatggccggcatgggcccggac
gagtcggcgcgcatggtggacctgatcgaatcgctgcgcgaatcgatggcgatcctgctg
atcgagcacgacatggacgcggtgttccgcctggccgaccggctcacggtgctggtgcag
gggcgcgtgctgatgagcggcacggccgacgaagtgcgcgggcatcccgatgtgcaggcg
gtgtacctcggtacggaagcagagggacacgcatga
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