Variovorax paradoxus B4: VAPA_1c04440
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Entry
VAPA_1c04440 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter,branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c04440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c04440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c04440
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
Motif
Other DBs
NCBI-ProteinID:
AGU47574
UniProt:
T1X5I4
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All DBs
Position
1:complement(473411..474616)
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AA seq
401 aa
AA seq
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MSHPSPKSPALPRTLLSLLLCGAALGGAASAMAAPVKVGLALDISGPFAALGAEARDGFA
LGIKQLGGKLGGQDVEFVQADMAGSPDQAKQLVDRMIQRDKIDIFSGPIGSNVALAVGPT
LFNAKVPYLSANAGPSQFAGAQCNAYFFGTAYQNDQFHEAAGKFAQDRGFKKTVLIAPNY
PAGKDALGGFKRQFKGQVADELYTKLGQIDYAAELAQLRAAKPDSIYFFLPGAMGINFIK
QFVGAGLSKDITLVTSGFSADEDVIGAVGEPMLGLFNTSHWAHDLDNAANKAFVAAFRKE
YNGRYPSVYAAQAYDAILAMDAAVKQSGGNAQNREAVVAALKKANYASTRGSFKYANNHY
PVENFYLRVIGKDAQGKVTNKLINTVLTNYGDSYADKCPLK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgtccccgaagtcgcccgcgctgccgcgcaccctgctttcgctgctgctc
tgcggtgcagcccttggtggcgcggcatcggccatggccgcgcccgtgaaggtgggcctg
gcgctcgacatctcgggcccgttcgcggcattgggcgccgaggcgcgcgacggcttcgcg
ctcggcatcaagcagctgggcggcaagctcggcgggcaggacgtggagttcgtgcaggcc
gacatggccggcagccccgaccaggccaagcagctggtcgaccgcatgatccagcgcgac
aagatcgacatcttcagcggcccgatcggctccaacgtcgcgctggccgtgggcccgacg
ctgttcaacgccaaggtgccgtacctctcggccaatgccggcccgagccagttcgcgggc
gcgcagtgcaatgcctacttcttcggcaccgcctaccagaacgaccagttccacgaggcc
gccggcaagttcgcgcaggaccgcggcttcaagaagaccgtgctgatcgcccccaactac
ccggcgggcaaggatgcgctgggcggcttcaagcgccagttcaagggccaggtggccgac
gagctctacaccaagctcggtcagatcgactacgccgccgaactcgcgcagctgcgcgcg
gcgaagcccgactcgatctacttcttcctgcccggcgcgatgggcatcaacttcatcaag
cagttcgtgggcgcgggcctgtcgaaggacatcacgctcgtgaccagcggcttctcggcc
gacgaggacgtgatcggcgcggtgggcgagccgatgctcggcctgttcaacacctcgcac
tgggcgcacgacctcgacaacgccgccaacaaggccttcgtggccgcgttccgcaaggaa
tacaacggccgctatccgtcggtgtatgcggcgcaggcctatgacgcgatcctggcgatg
gacgcggccgtgaagcaatcgggaggcaacgcccagaaccgcgaagccgtggtcgccgcg
ctgaagaaggccaactacgcatcgacgcgcggcagcttcaagtacgcgaacaaccactat
ccggtcgagaacttctacctgcgcgtgatcggcaaggacgcgcagggcaaggtcacgaac
aagctgatcaacacggttctcacgaactacggcgactcgtacgccgacaagtgtcccctc
aagtga
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