Variovorax paradoxus B4: VAPA_1c04490
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Entry
VAPA_1c04490 CDS
T02835
Symbol
rbsC2
Name
(GenBank) putative ribose ABC transporter, permease protein RbsC
KO
K10440
ribose transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c04490 (rbsC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c04490 (rbsC2)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VAPA_1c04490 (rbsC2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AGU47579
UniProt:
T1X5I9
LinkDB
All DBs
Position
1:complement(482135..483151)
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AA seq
338 aa
AA seq
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MNYPAQLDAGLAPRPSGGGPVKPANKLTSMREMGLLLIIAVLCVAMSFASPYFLTWDNVR
AMLLSFSIEGIVVVGMTILLIVGGIDLSVGSVVCFAMVVTGKLFLMGVDPWIASLVAIGA
SGLVGAMIGGCVTRIGLNHFIASLAFMVIVRGLCLALTQGTPQSLFSLPAEFKFIGQGTL
FGIPAVILIFVAIVVVSDFVLRRSTLLRRVFYTGSNEKAALYSGIRVGRVKFWVTVLCSA
SAGLAGVIYTARFGAATPTFGVGMELNVIAAAVIGGASLKGGSGTVLGAVLGLALLSVVT
SSLILLDVSPYWQDVIKGLILLAAVTIDHLLNTRKTTR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaactacccggcacaactcgatgcgggccttgcaccgcgcccatcgggaggcggcccc
gtgaaacccgccaacaagctcacgagcatgcgcgagatgggcctgctgctgatcattgcg
gtgctgtgcgtggcgatgagcttcgcatcgccctacttcctcacctgggacaacgtgcgc
gccatgctgttgtccttctcgatcgaaggcatcgtggtggtgggcatgaccattctgctg
atcgtcggcggcatcgacctgtcggtgggctcggtggtctgcttcgcgatggtggtcacg
ggcaagctgttcctgatgggcgtggacccatggatcgcgagcctggtggccatcggtgcg
agcgggctcgtcggcgcgatgatcggcggctgcgtcacgcgcatcgggctgaaccatttc
atcgcctctctggccttcatggtgatcgtgcgcgggctgtgcctggcgctcacgcagggc
acgccgcagtcgctgttctcgctgccggccgagttcaagttcatcgggcagggcacgctg
ttcggcattcctgccgtcatcctgatcttcgtggcgatcgtggtcgtgagcgacttcgtg
ctgcgccgctcgaccttgctgcggcgcgtgttctacaccggcagcaacgagaaggccgcg
ctgtactcgggcattcgcgtgggccgcgtgaaattctgggtcacggtgctgtgctccgca
tcggcgggcctggccggcgtgatctacacggcccgcttcggcgccgccacgcccaccttc
ggcgtgggcatggagctcaacgtgattgccgccgcggtgatcggcggcgcgagcctcaag
ggcggatcgggcacggtgctgggcgcggtgctcggcctggcgctgctgtcggtggtgacc
agctcgctgatcctgctcgacgtgtcgccctactggcaggacgtgatcaagggcctgatc
ctgctcgcggccgtgaccatcgaccacctcctgaacacgagaaagacaacgcgatga
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