Variovorax paradoxus B4: VAPA_1c04750
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Entry
VAPA_1c04750 CDS
T02835
Symbol
dppF
Name
(GenBank) dipeptide ABC transporter, ATP-binding protein DppF
KO
K12372
dipeptide transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c04750 (dppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c04750 (dppF)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
VAPA_1c04750 (dppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_16
NACHT
AAA_21
nSTAND3
SMC_N
nSTAND1
RsgA_GTPase
AAA_29
ATP-synt_ab
AAA_25
NB-ARC
ATPase
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AGU47605
UniProt:
T1X641
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All DBs
Position
1:511824..512858
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AA seq
344 aa
AA seq
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MSGDVVVEARNLQRTYEIRRGMFRAPAQLRAVGDISFRIERGRTLAVVGESGCGKSTLAR
MVALIEKPTAGQLTLVGHDAVDPPSDRRRELRQAVQLVFQNPYGSLNPRKKISAVLEDPL
AINTALGKPERAAKAREMLARVGLRPEHANRYPHMFSGGQRQRIAIARALMLEPRLLVAD
EPVSALDVSIQAQVLNLLADLQAELGLAYLFISHDLGVVRHIAHDVLVMYLGHAVEQGPK
ARIFARPLHPYTQALLASTPGLSSQRIVLKGELPSPLNPPSGCVFNTRCPHVTQRCREER
PLLRALDERLVACHYAEKFLDGTPPVSADVPLSPPFVAPLAMNP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgatgtcgtcgtggaggcgcgcaacctgcagcgcacctatgaaatacggcgc
ggcatgttccgcgcacctgcgcagttgcgcgcggtgggcgatatctcgtttcgcatcgag
cgcggtcgaacgctggcggtggtcggcgaatcgggctgcggcaagtccacgctcgcgcgc
atggtcgcgctgatcgagaagcccacggccgggcagctcacgctggtcggccacgacgcg
gtggacccgccctccgatcgccggcgcgaactgcgccaggcagtgcagctggtgttccag
aacccctatggttcgctcaatccacgcaagaagatcagcgccgtgctcgaggatccgctg
gccatcaacacggcgctcggcaagcccgagcgggccgccaaggcgcgcgagatgcttgcg
cgcgtgggcctgcggcccgagcatgcgaaccgctatccgcacatgttctcgggcggccag
cgccagcgcattgccattgcgcgcgcgctcatgctggagccgcgccttctggtggccgac
gagccggtatcggcgctcgacgtgtcgatccaggcgcaggtgctgaacctgctggccgac
ctgcaggccgaactcggcctggcctatctcttcatttcgcacgatctgggcgtggtgcgg
cacatcgcgcacgacgtgctggtgatgtacctcggccatgcggtggagcagggccccaag
gcacgcatcttcgcgcggccgctgcatccctacacgcaggcgctgctggcgtccacgccc
gggctcagcagccagcgcatcgtgctcaagggcgagctgccgtcgccgctgaatccgcct
tcgggctgcgtcttcaacacgcgctgtccgcacgtgacgcagcgctgccgcgaggagcgg
cccctgctgcgcgcgctcgacgagcggctggtggcctgccactacgccgagaagtttctc
gatggcacgccgccggtcagcgccgatgtgcctttgtccccgccgttcgtcgcgcccctg
gcgatgaacccctag
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