Variovorax paradoxus B4: VAPA_1c04950
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Entry
VAPA_1c04950 CDS
T02835
Symbol
glgB1
Name
(GenBank) 1,4-alpha-glucan-branching enzyme Glgb
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00500
Starch and sucrose metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
Module
vpd_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vpd_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VAPA_1c04950 (glgB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpd04147
]
VAPA_1c04950 (glgB1)
Enzymes [BR:
vpd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
VAPA_1c04950 (glgB1)
Exosome [BR:
vpd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VAPA_1c04950 (glgB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgB_N
CBM_48
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AGU47625
UniProt:
T1X656
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All DBs
Position
1:complement(534876..537047)
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AA seq
723 aa
AA seq
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MPPLLLPEREVHALMRAEHDDPFAVLGPHETRDGLLVRALLPGAQSVAVMHTRTGWPLAM
LSRQEGSDLFAGLVPAAEALLGYSFQVDWGTHTSRLEDPYRFAFVLGATDVWLLSEGTHL
RPWERLGAHLREMDGVKGVAFAVWAPNARRVSVVGDFNNWDGRRHTMRLRRECGVWEIFA
PQVAVGDSYEFEILSAQGEVLRKADPFAFSSRLRPETACVVAPLPAPMAMPPERAAANGR
HAPMSIYEVHLGSWRRKNGHEWLDYRELADTLVPYARDMGFTHIELLPVSEHPFDGSWGY
QPIGLYAPTSRFGTPGDFRHLVEAAHAAGLGVILDWVPAHFPTDAHGLGRFDGTALYEYA
DPREGFHNDWKTLIFNYGRTEVRNYLVGNALYWLERYGVDGLRVDAVASMLYRDYSRKPG
EWVPNAYGGRENLEAIAFLRRMNQVVGVERPGAVTLAEESTSFPGVTRPPEDGGLGFHYK
WNMGWMNDTLAYAGTDPVHRKHHHQQITFGLMYAHSENFVLPLSHDEVVHGKGSMLGRMP
GDEWQKFAGLRNLYGYLWAYPGKKLLFMGGEFAQAAEWNADRSLDWHLLEHASHQGVRRL
VRDLNNVYRHFPALYELDTERAGFEWLVHDDWEQSVFAFVRRARDGSFVVAVCNFTPLPR
HGYRLGVPAAGAYREAINTDGAVYGGSGVGNGVVDSAPVPWHGRADSISISVPPLATVMW
VLA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctgctgctgcctgaacgcgaagtccatgcgctgatgcgcgccgagcacgac
gatccgttcgcggtgctcggcccccacgaaacacgcgacggcctgctggtgcgcgcgctg
ctgccgggggcgcagagcgtggccgtgatgcacacgcgcacgggctggccgctggccatg
ctgtcgcggcaggaaggctccgacctcttcgcgggcctggtgcccgcggcggaggcgctc
ctgggctattcgttccaggtcgactggggcacgcacacctcgcggctcgaggacccgtac
cgctttgccttcgtgctgggcgccaccgatgtgtggctgctgtccgagggcacgcacctg
cggccctgggagcggctgggcgcgcacctgcgcgagatggatggcgtgaagggcgtggcc
ttcgcggtctgggcgcccaatgcgcggcgcgtctcggtggtcggcgacttcaacaactgg
gacggccggcgccacacgatgcggctgcgccgcgagtgcggcgtgtgggaaatcttcgcg
ccgcaggtggccgtgggcgacagctacgagttcgaaatcctctcggcccagggcgaggtg
ctgcgcaaggccgaccccttcgccttttcctcgcgcctgcggcccgagaccgcctgcgtg
gtggcgccgctgcccgcaccgatggccatgccgcccgagcgtgccgccgccaatggccgc
catgcgccgatgagcatctacgaggtgcacctgggctcctggcgccgcaagaacggccat
gaatggctggactaccgcgagctggccgacacgctggtgccgtacgcgcgcgacatgggc
ttcacgcacatcgagctgctgccggtcagcgagcacccgttcgacggctcgtggggctac
cagccgatcggcctttatgcgcccacctcgcgcttcggcacgcccggcgacttccgccat
ctcgtcgaagccgcgcatgccgcggggctgggcgtgatcctcgactgggtgcccgcgcac
tttcccaccgacgcgcacggcctcggccgtttcgacggcaccgcgctctacgaatacgcc
gacccgcgcgaaggcttccacaacgactggaagacgctcatcttcaactacggccgtacg
gaggtgcgcaactacctggtcggcaatgcgctgtactggctcgagcgctacggcgtggac
ggcctgcgcgtcgatgcggtggcctccatgctctaccgcgactacagccgcaagcccggc
gaatgggtgcccaacgcctatggcgggcgcgagaacctcgaagccatcgctttcctgcgg
cgcatgaaccaggtggtgggcgtcgagcgcccgggcgccgtcacgctggccgaggagtcg
acgagttttccgggcgtgacgcggccgcccgaggatggcggcctcggcttccactacaaa
tggaacatgggctggatgaacgacaccctggcctatgcgggcaccgacccggtccaccgc
aagcaccaccaccagcagatcaccttcggcctgatgtatgcgcacagcgagaacttcgtg
ctgccgctctcgcacgacgaggtggtgcacggcaagggctcgatgctcgggcgcatgccc
ggcgacgagtggcagaagttcgcggggctgcgcaatctttatggctacctctgggcctat
ccgggcaagaagctgctgttcatgggcggcgaattcgcccaggcagcggaatggaacgcc
gaccgcagcctcgactggcacctgctggagcacgcgtcgcaccagggcgtccggcggctg
gtgcgcgacctgaacaacgtgtaccggcacttccccgcgctgtacgaactcgataccgaa
agggccggcttcgagtggctggtgcatgacgactgggagcagtcggtgttcgccttcgtg
cgccgggcccgcgacggctctttcgtggtggcggtgtgcaacttcacgccgctgccgcgc
cacggctatcgcctcggggtgcctgcggcgggcgcgtaccgcgaggccatcaacaccgac
ggcgccgtgtacggcggcagcggtgtcggcaatggcgtggtcgacagcgcaccggttccc
tggcacggcagggccgactccatttccatcagcgtgccgcccctggccaccgtgatgtgg
gtgctggcttga
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