Variovorax paradoxus B4: VAPA_1c04960
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Entry
VAPA_1c04960 CDS
T02835
Name
(GenBank) putative alpha-glucosidase
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00052
Galactose metabolism
vpd00500
Starch and sucrose metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VAPA_1c04960
00500 Starch and sucrose metabolism
VAPA_1c04960
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
VAPA_1c04960
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Malt_amylase_C
SusG_C
Motif
Other DBs
NCBI-ProteinID:
AGU47626
UniProt:
T1X5C2
LinkDB
All DBs
Position
1:complement(537053..538723)
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AA seq
556 aa
AA seq
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MRSSNNSNSEWWRGAVIYQIYPRSFMDSNGDGIGDLPGITSRLEHVASLGADAIWVSPFF
RSPMKDFGYDVADYRAVDPIFGTLADFDEMLARAHALGLKIIIDQVLSHTSDQHAWFAES
RTSRNNPKADWYVWADPRPDGTPPTNWLSVFGGPAWQWDSRRRQYYLHSFLKEQPDLNFH
CAEVQEALLGEVRFWCERGVDGFRFDACNHQFHDALLRDNPPSSAASLDAVSTVRADNPY
AMQQHLYDKSQMENLGFLESLRGLLDDYGAVALGEVGDENAPPVMAQYTELGKRLHLAYS
FSLLTAEHSARHLRHQVETLDHALAPTGGWGCWAVSNHDVPRVATRWNGGGPEDTRRDRL
WLALLLALRGSASIYQGEELGLPEAEVPFELLQDPYGRAFWPEFKGRDGCRTPMPWKADE
LHAGFTTGGPWLPVYGRHLPLAVDRQSTDPDSMLAFSRALLRWRRTQPLLRTGSIAFLDA
PEPVLRFERREGNQSLQAVFNLGGEPVSIALREALEPLAGHPLSSSSSLQAGGERRMLAL
APYGVFFGRPAGKEQM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcagtaacaacagcaacagcgaatggtggcgcggcgcggtgatctaccagatc
tatccgcgcagcttcatggacagcaacggcgatggcatcggcgacctgcccggcatcacg
tcgcggctcgagcacgtggcaagcctgggggccgatgcgatctgggtgtcgcccttcttc
cgttcgccgatgaaggacttcggctacgacgtggccgactaccgcgccgtcgatccgatc
ttcggcacgctggccgatttcgacgagatgctggcgcgcgcgcatgcgctgggcctgaag
atcatcatcgaccaggtgctttcgcacacctccgaccagcacgcctggttcgccgaaagc
cgcacgagccgcaacaaccccaaggccgactggtacgtgtgggccgacccgcggcccgac
ggcacgccgcccaccaactggctgtcggtcttcggcggaccggcctggcaatgggattcg
cgccgccgccagtactacctgcacagtttcctcaaggagcagcccgacctgaacttccac
tgcgccgaggtgcaggaagcgctgctgggcgaggtgcgcttctggtgcgagcgcggcgtg
gacggcttccgcttcgatgcctgcaaccaccagttccacgacgcgctgctgcgcgacaac
ccgccgtccagcgccgcctcgctggacgcggtgagcacggtgcgggccgacaacccctat
gccatgcagcagcacctctacgacaagagccagatggagaacctgggcttcctcgagagc
ctgcgcgggctgctcgatgactacggcgcggtcgcgctcggcgaggtcggcgacgagaac
gcgccgcccgtcatggcgcagtacaccgaactgggcaagcgcctgcacctggcctacagc
ttcagcctgctgacggccgagcacagcgccaggcatctgcgccaccaggtcgagacgctc
gaccatgcgctcgcgccgacgggcggctggggctgctgggccgtgtccaaccatgacgtg
ccgcgcgtggccacgcgctggaacggcggcggcccggaagacacgcggcgcgaccggctc
tggctcgcgctgctgctggcgctgcgcggcagcgccagcatctaccagggcgaggagctc
ggcctgcccgaggccgaggtgccgttcgagctgctgcaagacccgtacggccgcgcgttc
tggcccgaattcaagggccgcgacggctgccgcacgcccatgccctggaaggccgacgaa
ctgcacgccggcttcaccaccggcgggccctggctgccggtctacggccgccacctgccg
ctggccgtcgaccgccagtccaccgatcccgactcgatgctcgcattcagccgcgcactg
ctgcgctggcgccgcacccagccgctgctgcgcaccggcagcatcgccttcctcgatgcg
ccggagcccgtgctgcggttcgagcggcgcgaagggaaccaatcgctgcaggctgtcttc
aacctgggaggcgagcccgtgtccatcgccctgcgcgaggcgctcgagccgctcgcgggg
catccgctttcatcgtcgtcgtccctgcaggccggcggcgaaaggcgcatgctggcgctg
gcgccctatggtgtctttttcggccggcccgctggcaaagaacagatgtga
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