Variovorax paradoxus B4: VAPA_1c05140
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Entry
VAPA_1c05140 CDS
T02835
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c05140
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c05140
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AGU47644
UniProt:
T1X5P8
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All DBs
Position
1:complement(558906..561137)
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AA seq
743 aa
AA seq
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MSAAPFLRLRPTVAASLLALHAVAALAQTTPAQPAPAVPAASPSTNGTLATITVEASADA
SAEGLTKPYAGGQVARGGRVGILGNQDMMSTPFSSTNYTNELIQDQQAKSVADVLLNDPS
VRQARGFGNFQELYVVRGFPVYSDDVSYNGLYGMLPRQYIASEFFERVEVFRGANTFLNG
AAPGGSGIGGAINLLPKRAPNEPLTRVGFGVQTGGQGYVNLDLARRFGPDDSLGVRVNAV
RREGGTGVFKESQQLSAFGIGLDWHSRNVRLSADFGYQNYDLKDGRPSLTPSSTLPIPRA
PDAGSNFAQPWTYSKEKDKFATFRGEVDITDNITAWAAGGVRRSDEDNVLSNPTLTDAFG
NTSNTRFNNTRKDRIGTAEIGVRGNFVTGPVKHTVVASAATYSNDRDNAYTISRGSIRNN
IYAPSASPYPIANSFTGNTLEEPRLTDKIDTSSIAIADTMSFLDDRLLVTLGARRQTIKQ
TSFAYTTLKETSAYDKSKATPVAGVVFKITPTVSAYANYIEGLVKGNVAGTTVNNRPVTN
AGEVFAPYQAKQKEIGVKYDGGTLGASAAFFTTDQPTYYYSGQTYGLYGKQRNQGLEFSV
FGQPTKGLRLLGGLTLLDAKQKNTQGGATDGLTAIGVARQQANLGAEWDVPGVRNLSLNA
RLLYTSKQYANAANTQQIPGWTRFDVGARYLVDLGNGRALTLRARIDNLFNKSYWASVGG
TQGSNYLVLGAPRTFAVSGTIDF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgctccgtttctccggcttcgcccgaccgtggccgcctcgctgctcgccctt
cacgcagtggcggcccttgcccagaccaccccggcgcagccggctcccgcagtgccggca
gcctcgccgtcgacaaacggcacgctggccaccatcaccgtcgaagccagtgccgacgct
tcggccgagggcctgaccaagccctacgcgggcggccaggtggcgcgcggcggccgcgtc
ggcatcctgggcaaccaggacatgatgagcacgccgttctcgagcaccaactacaccaac
gagctgatccaggaccagcaggccaagagcgtcgccgacgtgctgctcaacgacccgtct
gtgcgccaggcgcgcggcttcggcaacttccaggagctctacgtggtgcgcggcttcccc
gtgtactcggacgacgtctcctacaacggcctctacggcatgctgccgcgccagtacatc
gcctccgaattcttcgagcgcgtggaagtgttccgcggcgccaacaccttcctgaacggc
gccgcgcccggcggcagcggcatcggcggcgcgatcaacctgctgcccaagcgcgccccc
aacgagccgctcacccgcgtcggcttcggcgtgcagaccggcggccaaggctacgtgaat
ctcgacctggcgcgccgcttcggtcccgacgacagcctgggcgtgcgcgtgaacgccgtg
cgccgcgaaggcggcaccggcgtgttcaaggaaagccagcagctcagcgccttcggcatc
ggcctcgactggcacagccgcaacgtgcggctgtcggccgacttcggctaccagaactac
gacctgaaggacggccgcccgagcctcacgccctcctcgacgctgccgattccccgcgca
cccgacgccgggtccaatttcgcccagccctggacctactcgaaggaaaaggacaagttc
gccaccttccgcggcgaggtcgacatcaccgacaacatcacggcctgggctgccggcggc
gtgcgccgcagcgacgaagacaacgtgctgtcgaacccgaccctcaccgatgcgttcggc
aacacgagcaacacgcgcttcaacaacacccgcaaggaccgcatcggcaccgccgagatc
ggcgtgcgcggcaacttcgtcaccggcccggtgaaacacaccgtggtggcctcggctgcc
acctacagcaacgaccgcgacaacgcctacacgatctcgcgcggcagcattcgcaacaac
atctacgcgccctccgcatcgccctacccgatcgccaacagcttcaccggcaacacgctc
gaagagccgcgcctgaccgacaagatcgacacgtcgagcattgccatcgccgataccatg
tccttcctggacgaccgcctgctggtcacgctcggcgcgcgccgccagaccatcaagcag
accagcttcgcctacaccacgctcaaggaaacgagcgcctacgacaagagcaaggccacg
ccggtggccggggtcgtattcaagatcacgccgaccgtgtcggcctacgccaactacatc
gaaggcctggtcaagggcaacgtggcgggcacgacggtgaacaaccgcccggtcaccaat
gccggcgaagtgttcgcgccctaccaggccaagcagaaggaaatcggcgtcaagtacgac
ggcggcacgctcggcgccagcgccgcgttcttcaccacggaccagcccacgtattactac
tcgggccagacctacggcctctacggcaagcagcgcaaccagggcctcgagttctcggtg
ttcggccagccgaccaagggcctgcgcctgctgggcggcctgacgctgctcgacgccaag
cagaagaacacgcaaggcggcgccaccgacggcctcaccgccatcggcgtggccaggcag
caggccaacctcggtgccgagtgggacgtgccgggcgtacgcaacctgtcgctgaatgcg
cgcctgctgtacacctccaagcagtacgccaacgccgccaacacccagcagatcccgggc
tggacgcgcttcgacgtcggcgcgcgctacctggtcgacctgggcaacggccgcgcgctc
acgctgcgcgcacgcatcgacaacctgttcaacaagtcgtactgggcgtcggtgggcggc
acacagggctccaactacctggtcctcggcgcaccgcgcaccttcgcggtgagcggcacc
atcgacttctga
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