Variovorax paradoxus B4: VAPA_1c05310
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Entry
VAPA_1c05310 CDS
T02835
Name
(GenBank) haloacid dehalogenase, type 2
KO
K01560
2-haloacid dehalogenase [EC:
3.8.1.2
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00361
Chlorocyclohexane and chlorobenzene degradation
vpd00625
Chloroalkane and chloroalkene degradation
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
VAPA_1c05310
00361 Chlorocyclohexane and chlorobenzene degradation
VAPA_1c05310
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.8 Acting on halide bonds
3.8.1 In carbon-halide compounds
3.8.1.2 (S)-2-haloacid dehalogenase
VAPA_1c05310
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Motif
Pfam:
Hydrolase
HAD_2
HAD
Hydrolase_6
SelB-wing_1
DUF6052
Phi-29_GP3
Motif
Other DBs
NCBI-ProteinID:
AGU47661
UniProt:
T1X5F1
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All DBs
Position
1:complement(577986..578663)
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AA seq
225 aa
AA seq
DB search
MDQPGAVLFDAYGTLFDVYSVGQTAERLFAGQGQALAAGWRDKQIEYTRLVTTSNHGAHY
RPFGELTRAALRYTCKRLGLDLTEAAEQQLMDQYRTLTAFPESREVLQALKARGVVTGIL
SNGDPGMLDAAVRSAGLDGLLDHVLSVDGIRKYKTHPDAYQLGVAATGLQPSRIAFVSCN
GWDALGTTWFGFRTLWVNRYQLPLEELGTPPERIGSSLRDVLGFF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacccggcgcagtgctcttcgatgcctacggcaccctgttcgacgtctacagc
gtcgggcagacggccgagcggctgttcgccggccagggacaggcgctggccgcgggctgg
cgcgacaagcagatcgaatacacgcgcctcgtcaccaccagcaaccacggcgcgcactac
cggcccttcggcgaactcacgcgcgccgcgctgcgctacacctgcaagcgactgggcctc
gacctgaccgaagccgccgagcagcagctgatggaccagtaccgcacgctcacggctttt
cccgaaagccgcgaagtgcttcaggcactcaaggcacgcggcgtggtcaccggcatcctc
tcgaacggcgaccccggcatgctcgacgccgccgtgcgcagcgccgggctcgacggcctg
ctcgaccatgtgctgagcgtcgacggcatccgcaagtacaagacgcatcccgatgcgtac
cagctcggcgtcgccgccaccggcctgcagccttcgcgcatcgccttcgtcagctgcaac
ggctgggacgcgctcggcaccacctggttcgggttccgcacgctctgggtcaaccgctac
cagctccccctcgaagaactcggcacgccgcccgaacgcatcggcagcagcctgcgcgac
gtgctcgggttcttctga
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