Variovorax paradoxus B4: VAPA_1c05410
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Entry
VAPA_1c05410 CDS
T02835
Symbol
argS
Name
(GenBank) arginine--tRNA ligase ArgS
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAPA_1c05410 (argS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpd01007
]
VAPA_1c05410 (argS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c05410 (argS)
03029 Mitochondrial biogenesis [BR:
vpd03029
]
VAPA_1c05410 (argS)
Enzymes [BR:
vpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
VAPA_1c05410 (argS)
Amino acid related enzymes [BR:
vpd01007
]
Aminoacyl-tRNA synthetase
Class I (G)
VAPA_1c05410 (argS)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VAPA_1c05410 (argS)
Prokaryotic type
Other AARSs
VAPA_1c05410 (argS)
Mitochondrial biogenesis [BR:
vpd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
VAPA_1c05410 (argS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
tRNA-synt_1d
Arg_tRNA_synt_N
tRNA-synt_1f
tRNA-synt_1
tRNA-synt_1g
Phage_base_V
Motif
Other DBs
NCBI-ProteinID:
AGU47671
UniProt:
T1X5F9
LinkDB
All DBs
Position
1:587897..589582
Genome browser
AA seq
561 aa
AA seq
DB search
MLLVKQELLAALANTLESLSPGAGAKAAFESPKVAAHGDFASTAAMQLAKPLGRKPRELA
EELSAALLATPVFGHWVEAIEIAGPGFLNIRLKTAAKQQIVREVLAAGSAFGQQPATGEK
VLVEFVSANPTGPLHVGHGRQAALGDAICNLRASQGDTVWREFYYNDAGVQIQTLAHSTQ
LRARGFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSDDREYTASGNIEDLDSIR
EFAVAYLRREQDLDLQAFRVRFDNYYLESSLYTSGRVEAAVQKLVAAGKTYEQDGALWLR
STDYGDDKDRVMKKQDGTYTYFVPDVAYHIAKWERGFHKVVNIQGTDHHGTIARVRAGLQ
AAGVGIPEGYPDYVLHTMVRVMKGGEEVKISKRAGSYVTLRDLIEWTSTDAVRFFLLSRK
PDTEYTFDVDLAVTKNNDNPVYYVQYAHARICSVLAGWGGNVGALGNVDLSPLESPAAQA
LMLLLAKYPAMLTAAAKDFAPHDVTFYLRELAASYHSYYDAERILVDDEPVKLARLALVA
ATAQVLHNGLAILGVSAPSKM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctattggtcaaacaggagctgctcgcggcgctcgcgaacacgctcgaatccctctcg
cccggcgctggcgccaaagccgcgttcgagtcgcccaaggtggctgcccacggcgatttc
gccagcacggccgccatgcaactcgccaagccgctcgggcgcaagccgcgcgaactggcc
gaggagctcagtgccgcgctgctcgccaccccggttttcggccattgggtcgaagccatc
gagattgccgggcccggttttctcaacatccgcctcaagacggccgccaagcagcagatc
gtgcgcgaagtgctggccgcgggcagcgccttcgggcaacagcccgccaccggcgaaaag
gtgctggtcgagttcgtctcggccaacccgaccgggccgctgcacgtcggccatggccgc
caggctgcgctcggcgacgccatctgcaacctgcgcgcctcccagggagacaccgtctgg
cgcgagttctattacaacgacgccggcgtgcagatccagacgctggcccacagcacccag
ctgcgcgcccgcggcttcaagcccggcgaccccgaatggccgagcggcgaaaaggcgccc
gcctacaacggcgactacatcgccgacatcgccgaagacttcaaggcgaagaagaccgtc
aagtcggacgatcgcgaatacaccgccagcggcaacatcgaagacctcgattccatccgc
gaattcgcggtggcctacctgcgccgcgagcaagacctcgacctgcaggcctttcgcgtg
cgcttcgacaactactacctcgagtccagcctctacaccagcggccgcgtcgaggccgcg
gtccagaagctcgtggccgccggcaaaacttatgagcaggacggcgcgctctggctccgg
tcgaccgactacggcgacgacaaggaccgcgtgatgaagaagcaggacggcacgtacacg
tacttcgtgcccgacgtcgcctaccacatcgccaagtgggagcgcggcttccacaaggtg
gtcaacatccagggcaccgaccaccacggcaccatcgcgcgcgtgcgcgccggcctgcag
gccgcgggcgtcggcatccccgagggctaccccgactacgtgctgcacaccatggtgcgc
gtgatgaagggcggcgaagaggtcaagatcagcaagcgcgcgggcagctacgtcaccttg
cgcgacctgatcgaatggaccagcaccgacgccgtgcgcttcttcctcctgagccgcaag
cccgacaccgaatacaccttcgacgtcgacctggccgtgaccaagaacaacgacaacccg
gtttattacgtgcagtacgcccatgcgcgcatctgctcggtgctggcgggctggggtggc
aacgtcggcgccctcgggaacgtggacctgtcgccactcgaaagccccgccgcgcaggcg
ctcatgctgctgctggccaagtaccccgccatgctcacggcggccgccaaggatttcgcg
ccgcacgacgtcaccttctacctgcgcgaactggctgccagctaccacagctactacgac
gccgagcgcatcctggtcgacgacgagccggtcaagctggcgcggctcgcgctcgtcgcg
gccaccgcgcaggtgctgcacaatggcctcgcgattctcggcgtcagtgcgccgagcaag
atgtga
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