Variovorax paradoxus B4: VAPA_1c05900
Help
Entry
VAPA_1c05900 CDS
T02835
Name
(GenBank) putative phosphonate ABC transporter, periplasmic protein
KO
K02044
phosphonate transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c05900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c05900
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Phosphonate transporter
VAPA_1c05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phosphonate-bd
MaoC_dehydratas
TSP_NTD
Motif
Other DBs
NCBI-ProteinID:
AGU47720
UniProt:
T1X6D5
LinkDB
All DBs
Position
1:644084..645103
Genome browser
AA seq
339 aa
AA seq
DB search
MVSMARRGAAAAILALLAGLPLAAVAQPAPQPDAPVRFGILPLGGAFESRSDWDPLLAEL
SRAIDRPVSVLSVNSYEALEQAIRRDEVDMAFLSGKMALDAVTQRRMKVVAQVVRHDGLP
GYRALMLARKAPPFNSMKSLLAEPERWRLARGERQSVSGFIVPQLQLFLPNHIAMETRFL
SEIVGTHQTTALAVANNEADVATNNTADFERFKLRFPAEAQRLQVLWESELIPHAQIVVR
REYSPELRSRVQAFLVGYGRAKGSKGDAERVVLKSLHDLAGFVAADNSSLQPAAKLAYQL
AKQNAMSAQWVNDAARQARLSRIESGYAEQTAVLRDLSP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcatggcgcgccgcggcgccgcagccgccatccttgcgctgctcgcgggcctg
ccgctggcggccgttgcccagcccgcgccgcagccggatgcgccggtgcgcttcggcatc
ctgccgctgggcggcgccttcgagtcgcgcagcgactgggaccccttgctggccgagctg
agccgcgccattgacaggcccgtgagcgtgctgtcggtcaactcgtacgaagcgctcgag
caggccatccggcgcgacgaagtcgacatggcgttcctgtccggcaagatggcgctcgac
gccgtcacccagcggcgcatgaaggtcgtggcccaggtggtgcggcacgacgggctgccc
ggctaccgtgccctgatgctggcgcgcaaggcgcccccgttcaacagcatgaagagcctg
ctcgcggagccggaacgctggcgcctcgcgcgcggcgagcggcagtcggtgtcgggcttc
atcgtgccgcagctgcagctgttcctgcccaaccacatcgcgatggagacgcgcttcctg
agcgagatcgtcggcacccaccagaccaccgcgctggccgtggccaacaacgaagccgac
gtggccaccaacaacacggccgatttcgagcgcttcaagctgcgttttccggccgaggcc
cagcggctgcaggtgttgtgggagtcggagctcattccgcatgcgcagatcgtggtgcgg
cgcgaatattcgcccgagctgcgaagccgcgtgcaggccttcctggtcggctacgggcgc
gcgaagggctccaagggcgatgcggagcgcgtggtgctcaagtcgctgcatgacctggcc
gggttcgtggccgcggacaacagctcgctgcagcccgccgccaagctggcctatcagctg
gccaagcagaatgccatgagcgcgcagtgggtcaacgatgcggcgcggcaggcgcggctc
tcgcgcatcgaaagcgggtacgcggaacagaccgccgtgctgcgcgacctgtctccctga
DBGET
integrated database retrieval system
