Variovorax paradoxus B4: VAPA_1c06910
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Entry
VAPA_1c06910 CDS
T02835
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c06910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c06910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c06910
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c06910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
Motif
Other DBs
NCBI-ProteinID:
AGU47821
UniProt:
T1X5U2
LinkDB
All DBs
Position
1:complement(755817..756995)
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AA seq
392 aa
AA seq
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MTTPNTSFRRTALALTALASAGIGHLASAATIGLMAPLSGPIAVVGQDQVDGFMLAVEQL
GGKLGGQAATVLKEDDQLKPEIGGQIVRKFIDKDKVDAIVGLSFSNVMMASLPRIAETGT
VAIATNAGPSPVAGAGCKANVFSTAWQNDGAAEAMGKFAQDRGVKKVYLMAPNYQAGKDM
LSGFKRYFKGQIVEEVYTQVNQPDYSAELAQLQAAKPDAAFVFYPGGMGVNFIKQMAQAG
LMAKIPLYSVFTVDGTTLPALRDAAVGSISGAMWDAALDTPENKKFVAAFEAKYKRTPSE
YAATAYDAANLLNIALGKVKPGDSKALSAAVRAAGSELKSVRGPFAFNNNNMPVQNYYAF
ETVKDGGRITGKLLATPLTKHVDAYHTQCAQK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccgaacacctctttccgccgcactgctttggcactcaccgcactggccagc
gcgggcataggtcatctcgcgagcgcagccacgatcggcctcatggcgccgctttccggg
cctattgctgtcgtgggtcaggaccaggtcgacggcttcatgctggccgtcgaacaactg
ggcggcaagctcggcggccaagcggccaccgtgctgaaagaggacgaccagctgaagccg
gagatcggcggccagatcgtgcgcaagttcatcgacaaggacaaggtcgacgccatcgtt
ggcctgagcttctcgaacgtcatgatggcaagcctgccgcgcattgccgaaaccggcacc
gtggccatcgcgaccaatgcaggaccgtcgccagtcgctggcgccggctgcaaggcgaat
gtcttctcgacggcttggcagaacgacggtgcagccgaagcgatgggcaagttcgcgcag
gaccgcggtgtgaagaaggtctacctgatggcgccgaactaccaggccggcaaggacatg
ctgagcggcttcaagcgctacttcaaggggcagatcgtcgaagaggtctacacgcaggtg
aaccagccggactactccgccgaactcgctcaactccaggcggccaagcctgatgcggcg
ttcgtgttctatccgggcggcatgggtgtcaacttcatcaagcagatggcacaggccggc
ctgatggcgaagattccgctgtactcagtcttcacggtggacggcaccacgttgcccgca
ttgcgcgatgcggccgtcggcagcatcagcggcgcgatgtgggacgccgcgctggacacg
cccgagaacaagaagttcgtcgccgccttcgaagccaagtacaagcgcacgccaagcgaa
tacgcagccaccgcgtacgacgcggccaacctgttgaacatcgcgctcggaaaggtcaaa
ccgggtgacagcaaggccctgtctgctgcggtccgcgccgccggcagcgagctgaaatcg
gtgcgcggccctttcgcattcaacaacaacaacatgccggtgcagaactactacgccttc
gagaccgtgaaggacggcgggcgcatcaccggcaagctgcttgcaacgccactgacgaag
cacgtcgacgcgtatcacacgcagtgcgcacagaagtga
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