Variovorax paradoxus B4: VAPA_1c07110
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Entry
VAPA_1c07110 CDS
T02835
Name
(GenBank) putative argininosuccinate lyase
KO
K01755
argininosuccinate lyase [EC:
4.3.2.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00220
Arginine biosynthesis
vpd00250
Alanine, aspartate and glutamate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01230
Biosynthesis of amino acids
Module
vpd_M00844
Arginine biosynthesis, ornithine => arginine
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VAPA_1c07110
00220 Arginine biosynthesis
VAPA_1c07110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpd04147
]
VAPA_1c07110
Enzymes [BR:
vpd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.2 Amidine-lyases
4.3.2.1 argininosuccinate lyase
VAPA_1c07110
Exosome [BR:
vpd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VAPA_1c07110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ASL_C2
Motif
Other DBs
NCBI-ProteinID:
AGU47841
UniProt:
T1X5W0
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Position
1:complement(778672..780273)
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AA seq
533 aa
AA seq
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MKSMAVFISACIALASMVQAPARAADTGDTACRTTAECQAQVERIKGGATSDATSAQSKA
QDFFYWVGRINMASTVVNVEQGIIPAPLASKIAAGVAHSIDQAGKPGGRRPTDVLQIEKL
ITDQAGPEATLIHSGRSRQDIHATLYAAQLRTELLDFNDALNEVRTRLLASAAKNVETFV
PAYTNGVQAMPISYAHYLLAFADSFGRDAERLQQVYVRVNRSALGTAVLSNSSWLLDRRR
LASLLGFDALLVNSLDAGQISTYDIPIEAANLAGSSAIRVGAFMQDVHVQYHQVRPWLLL
APGKTYTSSAMPQKANPGVIQNARGKASDVVGAAQMVTLRAHNVTPGMTDYKNAWSPAGA
KTFVQAVDMMKQFADVLDSLRIDPKRSLEELDAEWTTSMELAETLQRTNRIPFRVGHHFA
SEVVVYARAKDLKPKEFPYAEAVRIYAEAGRKYQLTELKLPLDEIAFRQALSAENMVRTR
VGIGGPQPEEVRRMLAEANDLLAQDRAWVSERRAKLTQADASLNQAFFSLIKR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcatggccgtattcatctccgcttgcatcgctctcgccagcatggtccaagca
ccggcacgcgctgcggacacgggcgacacagcgtgccgaacgaccgccgagtgccaggcg
caagtcgagcgcatcaagggtggcgccaccagcgatgccaccagtgcgcaatcaaaggcg
caagactttttctactgggtgggccgcatcaacatggcgtccaccgtggtcaacgtcgag
cagggaatcattcccgcgccactggccagcaagatcgcagccggtgtcgcgcattcgatc
gaccaggccggcaagcccggcggcaggcgccccaccgatgtgctgcagatcgaaaagctc
attaccgatcaggcaggccccgaagccacgctgatccattccgggcgcagccgccaggac
atccacgccacactgtacgcagcccagttgcgtaccgagttgctggacttcaacgacgca
ctcaatgaagtgcgcacgcggctgctggccagcgcggcaaagaacgtggagaccttcgtg
ccggcctacaccaatggcgtgcaggccatgcccatcagctacgcgcactatctgctcgcc
ttcgccgattcgttcgggcgcgatgcagagcggctgcagcaggtgtacgtgcgcgtcaac
cgcagcgcgctgggcacagcggtgctctccaattccagctggctgctggaccgccggcgg
ctggcgtcactgttgggctttgacgcactgctggtcaactcgctggatgcggggcagatc
agcacttacgacatccccatcgaagccgccaacctcgccggctccagcgcgattcgcgtt
ggcgccttcatgcaggatgtgcacgtgcagtaccatcaggtccggccttggctgctcttg
gcgcctggcaaaacatacaccagcagcgcaatgccgcaaaaggccaatcccggcgtcatt
cagaacgcgcgcggcaaagcgtccgacgtggtgggcgcggcgcagatggtgacactgcgt
gcccacaacgtgaccccgggcatgaccgactataaaaacgcatggagcccggcgggcgct
aagacttttgtccaggcggtggacatgatgaagcaatttgccgacgtactggactcgctg
cgcatcgacccgaagcgctcgctagaggaactggacgccgaatggacgacatcgatggag
ttggctgagacgctgcagcgcacgaaccggattccattccgtgtcgggcaccattttgcg
tccgaggttgtggtctacgcgcgcgccaaggacctcaagcccaaggagtttccgtatgca
gaggccgtgcgcatctatgccgaggccggaagaaaataccagctgaccgaactgaagttg
ccgctggatgaaattgcgttccgccaggccttgtcggccgaaaacatggtgcgcacccgc
gttggtatcggtggcccgcaacccgaggaagtgcggcgcatgctggctgaagccaatgac
ctcctggcgcaggaccgcgcctgggttagtgaacgacgcgcgaaactgacgcaggcggat
gcgagcctgaatcaagctttctttagccttatcaagcgatag
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