KEGG   Variovorax paradoxus B4: VAPA_1c07680
Entry
VAPA_1c07680      CDS       T02835                                 
Name
(GenBank) transcriptional regulator, LysR family
  KO
K17737  LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpd03000]
    VAPA_1c07680
Transcription factors [BR:vpd03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    VAPA_1c07680
SSDB
Motif
Pfam: LysR_substrate HTH_1 PBP_like_2 HTH_30 HTH_IclR
Other DBs
NCBI-ProteinID: AGU47891
UniProt: T1X605
LinkDB
Position
1:complement(837405..838313)
AA seq 302 aa
MPAPELSSRQLRAFTALAEQCNFTRAAQTCHLSQPAFSALIRTLEETLGARLFDRDTRSV
QLTPEGRLFEPSARRLLDDMQGAIGDLADHAQRRKGRVSVAALPSLAAGRLPAILAEFMQ
AWPGITVELHDALSDACIAQLRSHQADFALAATGAGAAAASDLRGRKLCDDRFHLVCRKD
HPLASAARLTARQLAPWPFIQMARNSSVRQSLDAALHPLRLNAVFEVEHLATVMGLVEAG
IGISVVPELTLFHFQRETLVTRPLPLPGLTRTIYLVQRREGSLSVAAQTLHDLILERLGT
PA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgccagcgcccgagctttccagccgccaactgcgtgcgttcacggccttggccgagcag
tgcaacttcacgcgcgcggcacagacctgccatttgtcgcagcccgccttcagcgcgctg
atccgcacgctcgaggaaacgctcggcgcccggctgttcgaccgcgacacgcgcagcgtg
cagctcacgccagagggccggctgttcgaaccctcggcgcggcggctgctggacgacatg
cagggcgccatcggcgacctggccgaccacgcccagcggcgcaagggccgcgtgagcgtg
gcggccctgccctccctggccgccggccggctgccggccatcctggcggagttcatgcag
gcgtggcccggcatcacggtcgagctgcacgatgcgctctcggacgcctgcattgcccag
ctgcgcagccaccaggcggacttcgcgctcgcggcaacgggcgccggcgccgccgcggcc
agcgacctgcgcgggcgcaagctctgcgacgaccgctttcacctggtctgccgcaaggac
catccgctcgccagcgccgccaggctcacggcaaggcagctcgcgccatggcctttcatc
cagatggcgcgcaacagcagcgtgcgccagtcgctcgacgcggcgctgcacccgctgcgg
ctcaatgcggtgttcgaggtcgagcatctggccacggtgatggggctggtcgaggccggc
atcggcatcagcgtggtgccggaactcacgctcttccacttccagcgcgagacgctggtg
acgcggccgctgccgctgcccggcctcacgcgcaccatctacctggtgcagcgccgggag
ggaagcctctcggtggcggcgcagacgctgcacgacctgatcctcgagcggctgggcacg
ccggcctga

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