Variovorax paradoxus B4: VAPA_1c07820
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Entry
VAPA_1c07820 CDS
T02835
Symbol
hemE
Name
(GenBank) uroporphyrinogen decarboxylase HemE
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00860
Porphyrin metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01240
Biosynthesis of cofactors
Module
vpd_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VAPA_1c07820 (hemE)
Enzymes [BR:
vpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
VAPA_1c07820 (hemE)
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GFIT
Motif
Pfam:
URO-D
Motif
Other DBs
NCBI-ProteinID:
AGU47903
UniProt:
T1X5N5
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All DBs
Position
1:complement(856506..857618)
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AA seq
370 aa
AA seq
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MPFAPLQNDTFLRACWRQATDHTPVWLMRQAGRYLPEYVATRAKAGSFMGLATNVDYATE
VTLQPLARYPLDAAILFSDILTVPDAMGLGLSFEAGEGPRFAHPVRDEAAVAALEVPDMA
RLRYVFDAVASIRKALAGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMH
RLLAVNADSVATYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLAGLKRNGA
DGQPVPRIVFTKGGGLWLEAMRELDCEVLGVDWTVNLSAARRLVGEGTDGKAKALQGNID
PNVLFAPPAQIEAEVAKVLRAFGKPHADADAKGPTHIFNLGHGISQFTPPDHVAALVQAV
HAQSRALRKS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcgcccccttgcaaaacgacactttcctgcgggcctgctggcgccaggccaca
gaccacacgcccgtctggctcatgcgccaggccggacgctacctgcccgagtacgtggcc
acccgcgccaaggccggcagcttcatggggctggccaccaacgtcgactacgccaccgaa
gtcacgctgcagccgctcgcgcgctatccgctggacgcggccatcctgttctccgacatc
ctcaccgtgcccgacgccatggggctgggcctgtcgttcgaggccggcgaaggcccgcgc
ttcgcgcacccggtgcgcgacgaagcggccgttgcggcgctcgaggtacccgacatggcc
aggctgcgctatgtgttcgatgccgtggcgtcgatccgcaaggcgctggccggccgcgtg
ccgctgatcggtttttcgggcagcccctggacgctggcctgctacatggtggaaggcgcg
ggctccagtgactaccggctcgtgaagagcatgctctacagccgccccgacctgatgcac
cgcctgctcgcggtcaacgccgattcggtggccacctacctcaatgcgcagatcgacgcc
ggcgcgcaggccgtgatggtgttcgacagctggggcggcgtgctggccgacggcgcgttc
caggaattcagcctcgcctacacggcgcgcgtgctggccggcctcaagcgcaacggcgcc
gatggccagcccgtgccgcgcatcgtcttcaccaagggcggtggcctgtggctcgaagcc
atgcgcgaactcgactgcgaagtgctcggcgtcgactggaccgtgaacctctcggccgcg
cgccggctggtcggcgaaggcaccgacggcaaggccaaggccttgcagggcaacatcgac
cccaacgtgctgttcgcaccgcccgcgcagatcgaggccgaggtggcgaaggtgctgcgg
gccttcggcaagccgcatgccgatgccgatgccaagggcccgacccacatcttcaatctg
ggccacggcatcagccagttcacgccgccggaccatgtggcggcgctggtgcaggccgtg
catgcacaatcgcgcgccctgcgcaaaagttaa
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