Variovorax paradoxus B4: VAPA_1c08240
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Entry
VAPA_1c08240 CDS
T02835
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00051
Fructose and mannose metabolism
vpd00541
Biosynthesis of various nucleotide sugars
vpd01100
Metabolic pathways
vpd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
VAPA_1c08240
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VAPA_1c08240
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
VAPA_1c08240
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
AGU47944
UniProt:
T1X6I0
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Position
1:complement(904906..905943)
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AA seq
345 aa
AA seq
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MKKHAVVTGITGQDGAYLAELLLAKGYVVYGTYRRTSSVNFWRIEELGIQNNPDLHLVEY
DLTDLGNSIELIRQAEPVEVYNLAAQSFVGVSFNQPVATAQITGVGALHLLEAIRLVNPK
IRFYQASTSEMFGKVQAIPQVEDTPFYPRSPYGVAKLYAHWMTINYRESYDIFGCSGILF
NHESPLRGREFVTRKITDSVAKIKLGKLDVLELGNLDAKRDWGFAKEYVEGMWRMLQIDT
PDTYVLATNRTETVRDFVHMAFKGAGIAVDFKGSGEGESAVDTATGKTVMRINPKFYRPA
EVELLIGNPAKAKAKLGWEPKTTLEELCQMMVEADLRRNRQGFSF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacatgccgttgtaacgggcattaccggccaggacggcgcttatcttgccgag
ttgctgctcgccaagggatacgtcgtctatggcacctatcggcgcaccagttcggtcaac
ttctggcgcatcgaggaactgggcattcagaacaaccccgacctgcatctggtcgagtac
gacctgaccgacctgggaaattcgatcgagttgattcgccaagcggagccggtcgaggtc
tacaaccttgcggcccagagcttcgtgggcgtgagcttcaaccagcccgtcgcgaccgcc
cagatcacgggcgtgggtgccctgcatctgctcgaggccatccgcctcgtcaaccccaaa
atccgcttctatcaagcctctacctccgagatgttcggcaaggtgcaggccattccgcag
gtggaagacacacctttctatccgcgcagtccctacggcgtagccaagctctatgcccac
tggatgaccatcaattaccgcgagagctacgacatcttcggctgcagcggcatcctgttc
aatcacgaaagcccattgcgcggacgcgaattcgtgacccgcaagatcacggacagcgtt
gccaagatcaagcttggcaagctcgacgtcctcgagctcggcaacctcgacgccaagcgc
gattggggctttgcgaaggaatacgtcgagggcatgtggcgcatgctccagattgacacg
cccgacacatacgtgctggcaaccaaccgcaccgaaaccgtccgagacttcgtgcacatg
gcgttcaagggcgcgggcatcgcagtggatttcaagggcagcggcgaaggcgagtccgcc
gtggacacggccaccggaaagaccgtcatgcgcatcaacccgaagttctatcgacccgca
gaagtcgaactgctgatcgggaacccggccaaggccaaggccaaactcggctgggagccg
aagaccacgctcgaggaactttgccagatgatggtcgaggcagacctgcggcgcaatcgc
cagggcttctcgttttga
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