KEGG   Variovorax paradoxus B4: VAPA_1c08270
Entry
VAPA_1c08270      CDS       T02835                                 
Symbol
rfbD2
Name
(GenBank) putative O-antigen export system, permease protein RfbD
  KO
K09690  homopolymeric O-antigen transport system permease protein
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    VAPA_1c08270 (rfbD2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpd02000]
    VAPA_1c08270 (rfbD2)
Transporters [BR:vpd02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Homopolymeric O-antigen
    VAPA_1c08270 (rfbD2)
SSDB
Motif
Pfam: ABC2_membrane ABC2_membrane_3
Other DBs
NCBI-ProteinID: AGU47947
UniProt: T1X4V3
LinkDB
Position
1:complement(911209..912015)
AA seq 268 aa
MTQEIHSNLHRSALSDWWEGTRRTDIWWTLAWFDIVLRYRRSMLGPLWLTLSMGAMIGGM
GPLYSSLFGTELSKFFPHLALGIIFWGFFSSVVSEACNAFVGSSNYLKQGYFPISLFVWR
SIARNLIQFAHQIVLYIPVALWAGISLSWSALLVLPALAILVINAHALGLLLGLICTRYR
DVTQIVTSVMQMLMFLTPVFWLPESLPGRAQYILWNPFAQMLDLLRTPLMGGVAEMHSWL
GILAWTVVSVVASTLLFIKYRRRVVYWL
NT seq 807 nt   +upstreamnt  +downstreamnt
atgacccaagaaattcactccaacctccaccgcagcgccttgtccgactggtgggaaggc
acccgccggaccgacatatggtggaccctggcctggttcgacatcgtgctgcgctatcgg
cgctcgatgctggggccgctctggctcacgctgagcatgggcgcgatgatcggcggcatg
ggcccgctctacagctcgctcttcggcacggaactgtccaagttctttccgcacctcgca
ctcgggatcatcttctggggcttcttctccagcgtggtatccgaggcgtgcaacgcgttt
gtgggctcgtccaattacctgaagcagggctacttcccaatcagcctgttcgtctggcgc
agcatcgcgcgcaacctgattcagttcgcgcaccagatcgtgctgtatatcccggtggcg
ctctgggccggcatttcactgtcgtggtcggcactgctcgtactgccggccctcgcgatc
ctggtcatcaacgcgcatgctctcggcctgctgctcggcctgatctgcacgcgctaccgg
gacgtgacccagatcgtgaccagcgtgatgcagatgttgatgttcctgacgcccgttttc
tggcttcccgagagccttccggggcgtgctcagtacatcctgtggaatccctttgcacag
atgctcgacctgctgcgcactccgctgatgggcggcgtggcggaaatgcatagctggctg
ggcatcctggcctggacggtcgtgagcgttgtcgcctccacgctgctcttcatcaaatac
cgccggcgcgtcgtttactggctctga

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