Entry |
|
Symbol |
rfbD2
|
Name |
(GenBank) putative O-antigen export system, permease protein RfbD
|
KO |
K09690 | homopolymeric O-antigen transport system permease protein |
|
Organism |
vpd Variovorax paradoxus B4
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:vpd00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c08270 (rfbD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:vpd02000]
VAPA_1c08270 (rfbD2)
Transporters [BR:vpd02000]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
VAPA_1c08270 (rfbD2)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(911209..912015)
|
AA seq |
268 aa
MTQEIHSNLHRSALSDWWEGTRRTDIWWTLAWFDIVLRYRRSMLGPLWLTLSMGAMIGGM
GPLYSSLFGTELSKFFPHLALGIIFWGFFSSVVSEACNAFVGSSNYLKQGYFPISLFVWR
SIARNLIQFAHQIVLYIPVALWAGISLSWSALLVLPALAILVINAHALGLLLGLICTRYR
DVTQIVTSVMQMLMFLTPVFWLPESLPGRAQYILWNPFAQMLDLLRTPLMGGVAEMHSWL
GILAWTVVSVVASTLLFIKYRRRVVYWL |
NT seq |
807 nt +upstreamnt +downstreamnt
atgacccaagaaattcactccaacctccaccgcagcgccttgtccgactggtgggaaggc
acccgccggaccgacatatggtggaccctggcctggttcgacatcgtgctgcgctatcgg
cgctcgatgctggggccgctctggctcacgctgagcatgggcgcgatgatcggcggcatg
ggcccgctctacagctcgctcttcggcacggaactgtccaagttctttccgcacctcgca
ctcgggatcatcttctggggcttcttctccagcgtggtatccgaggcgtgcaacgcgttt
gtgggctcgtccaattacctgaagcagggctacttcccaatcagcctgttcgtctggcgc
agcatcgcgcgcaacctgattcagttcgcgcaccagatcgtgctgtatatcccggtggcg
ctctgggccggcatttcactgtcgtggtcggcactgctcgtactgccggccctcgcgatc
ctggtcatcaacgcgcatgctctcggcctgctgctcggcctgatctgcacgcgctaccgg
gacgtgacccagatcgtgaccagcgtgatgcagatgttgatgttcctgacgcccgttttc
tggcttcccgagagccttccggggcgtgctcagtacatcctgtggaatccctttgcacag
atgctcgacctgctgcgcactccgctgatgggcggcgtggcggaaatgcatagctggctg
ggcatcctggcctggacggtcgtgagcgttgtcgcctccacgctgctcttcatcaaatac
cgccggcgcgtcgtttactggctctga |