Variovorax paradoxus B4: VAPA_1c08390
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Entry
VAPA_1c08390 CDS
T02835
Name
(GenBank) transcriptional regulator, TetR family
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c08390
03036 Chromosome and associated proteins [BR:
vpd03036
]
VAPA_1c08390
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VAPA_1c08390
Chromosome and associated proteins [BR:
vpd03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
VAPA_1c08390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
HTH_20
fvmX1
EcoEI_R_C
HTH_11
TetR
GP3_package
HTH_23
TetR_C_25
TetR_C_13
TetR_C_15
HTH_5
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AGU47959
UniProt:
T1X6J6
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All DBs
Position
1:930273..930926
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AA seq
217 aa
AA seq
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MQNEETSYPGIETQTETLTPVAPVRKRPKPGERRVQILQALAAMLEQPGAERVTTAALAA
RLDVSEAALYRHFASKAQMFEGLIDFIEQSVFTLVNQILEREGATGAQQAAKILTLLVQF
AERNPGMTRVMVGDALVFENERLQQRMNQFFDKIEATLRQVLRGAAAADGSATPSVDAQV
RAAALTAFVVGQLQRFTRSGFRRAPSEHLEATIALIV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgaagagacaagctatcccggcatagaaacccagaccgagacgctgacaccc
gtcgcgccggtccgaaaacgccccaagcccggggagcggcgcgtgcagatcctgcaggcg
ctggccgccatgctcgagcagcccggcgccgagcgggtaacgaccgcggcactggctgcg
cggctcgacgtcagcgaagccgcgctctaccgccacttcgcgagcaaggcccagatgttc
gagggcctgatcgacttcatcgagcagagcgtcttcacgctggtcaaccagattctcgag
cgcgaaggcgcgacgggggcccagcaggccgcaaaaattctcacgctgctcgtgcagttt
gccgagcgcaaccccggcatgacgcgcgtcatggtgggcgacgcgctggtgttcgagaac
gagcggctccagcagcgcatgaaccagttcttcgacaagatcgaagccaccctgcgccag
gtgctgcgcggggcggccgccgcggacggctcggccaccccgagcgtggatgcgcaggtg
cgcgccgccgcgctcacggccttcgtggtcgggcagctgcagcgcttcacgcgctcgggc
ttccgccgggcgccgtcggaacacctcgaagccacgatcgcgctgatcgtctag
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