Variovorax paradoxus B4: VAPA_1c08540
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Entry
VAPA_1c08540 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, permease protein
KO
K01997
branched-chain amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c08540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c08540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c08540
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF6336
DUF6750
Motif
Other DBs
NCBI-ProteinID:
AGU47974
UniProt:
T1X6L2
LinkDB
All DBs
Position
1:944470..945342
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AA seq
290 aa
AA seq
DB search
MFDFGILFPSVLNGLTTGAVYALIALGLTLIYGVLHIINFAHGASLMLALYAVYFLKERL
GIDPYLALPIVVLGMFALGYALQRSVINRAGHGKDENILLATLGIAIVMENLALLFFKSD
TRNIDTAYSLSTVAIGPAMIAVPKLVAFAGALVVSGILFWIMGRTDLGRAIRAVAKEKEG
AKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYYVNPQVGGGFVLVAFTIVVLGGMGSF
VGALIGGLLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGMFGAKA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatttcggcattcttttcccgtcggtcctgaacgggctgacgacgggcgcggtg
tacgcactgatcgcactggggctcacgctgatctacggcgtcctgcacatcatcaacttc
gcgcacggcgccagcctgatgctggcgctgtatgcggtgtacttcctcaaggagcggctg
ggcatcgacccgtacctcgcactgcccatcgtcgtgctcggcatgttcgcgctcggctat
gcgctgcagcgcagcgtcatcaaccgcgcgggccacggcaaggacgagaacatcctgctc
gccacgctcggcatcgccatcgtcatggagaacctcgcgctgctgttcttcaagtcggac
acgcgcaacatcgacaccgcctattcgctcagcaccgtcgccatcggccccgcgatgatc
gccgtgcccaagctcgtggccttcgcgggggcgctggtggtgtctggcatcctgttctgg
atcatgggccgcaccgacctcggccgcgccatccgcgccgtcgccaaggagaaggaaggc
gccaagctcatgggcatcgacgtcgaccacgtctacgccatgagcttcggcatcggcctg
gcctgtctcggcgcagccgcctgcttcctgctgccggcctactacgtcaacccgcaggtg
ggcggcggcttcgtgctcgtggccttcaccatcgtcgtgctcggcggcatgggcagcttc
gtcggcgcgctcatcggcggcctcctggtcggcgtggtcgagtcgctcggcggactttat
cttggcgagtcgctggggcagatcggcatcttcgcgatcttcatcggcgtggtgctcttt
cgtccgcaaggcatgttcggagccaaggcatga
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