Variovorax paradoxus B4: VAPA_1c08550
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Entry
VAPA_1c08550 CDS
T02835
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, permease protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c08550
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c08550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c08550
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c08550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AGU47975
UniProt:
T1X737
LinkDB
All DBs
Position
1:945339..946322
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AA seq
327 aa
AA seq
DB search
MSAGNRQLAGIALFAVLVGCVPLVTKSGVTLNFVMMALYATLIAQAWNILGGFGGQFSFG
HALFFGTGAYVQAIAQLQGGINAWVALPLAVAGAALVGLFVGALSFRYGLKGSYFALVTL
AFAEVFRILALSVNFTGGGVGLMVPLRESVANLQFASRAGYLWVVLAMVVLALLVTWWLR
NGRFGAYLQAVRDNEDAARAVGVNPFRIKLAAIGLSAAFMGAAGAFYVQVFQYIDAGIAY
GPAVSVEALVAAIVGGMGTLWGPVLGAVVLHLLSDLTRNLFGELPGINMVIYGTVLVVIV
IFLPRGVAGLGLSVRQLWNAKQGGRHD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcaacaggcaactcgccggcattgcgctctttgccgtgctggtcggctgc
gtgccgctcgtcacgaagtcgggcgtgacgctgaacttcgtgatgatggcgctctacgcc
acgctcatcgcgcaggcctggaacatcctcggcggcttcggcgggcagttctcgttcggg
catgcgctgttcttcggcacgggcgcctacgtccaggccatcgcccagctgcagggcggc
atcaacgcctgggtggcgctgccgctggccgtggccggcgctgcgctggtcggtctcttc
gtgggcgcgctcagcttccgctatggcctcaagggctcctacttcgcgctcgtcacgctg
gccttcgcggaggtgttccgcatcctcgcgctgtcggtgaacttcacgggtggcggcgtc
gggctgatggtgccgctgcgcgaatcggtggccaacctgcagttcgcctcgcgcgccggc
tacctgtgggtggtgctggccatggtggtgctggcgctgctcgtgacctggtggctgcgc
aacggccgcttcggtgcctacctccaggccgtgcgcgacaacgaggatgcggcgcgcgcc
gtgggcgtgaacccatttcgcatcaagctcgcggccatcggcctctcggccgccttcatg
ggcgcggccggtgccttctacgtgcaggtgttccagtacatcgacgccggcatcgcctac
ggcccggccgtgtcggtcgaagccctggtggccgccatcgtgggcggcatgggcacgctg
tggggcccggtgctgggtgcggtcgtgctgcacctgctgtcggacctcacgcgcaacctg
ttcggcgagctgccgggcatcaacatggtgatctacggcacggtgctggtcgtgatcgtg
atcttcctgccgcgcggcgtcgccgggctggggctgtcggtgcggcagctgtggaatgcg
aagcagggaggccgccatgactga
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integrated database retrieval system
