Variovorax paradoxus B4: VAPA_1c08570
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Entry
VAPA_1c08570 CDS
T02835
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c08570
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c08570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c08570
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c08570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SbcC_Walker_B
AAA_22
nSTAND1
Zeta_toxin
RsgA_GTPase
DUF658
Motif
Other DBs
NCBI-ProteinID:
AGU47977
UniProt:
T1X4Y3
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All DBs
Position
1:947073..947783
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AA seq
236 aa
AA seq
DB search
MTALLEIQGLRGGYGRVEVLRGVDLQVNAGEMVALLGSNGAGKSTLNKMVCGLCPAWSGS
VRFDGKDLSGAHYRDVVKAGLIQVPEGRKVFPNLSVLENLELGSFTRARERRAANVEKMF
HIFPRLRERMAQHAGTMSGGEQQMLAIARGLMAEPVLLILDEPSLGLSPRLVEEMFTLIR
ELRDGGLAVLLVEQNVGQSLEIADRAYVLENGSVRFSGLPGELLGSDELRRAYLGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcttctggagattcaaggcctgcgcggcggctacggccgcgtcgaggtgctg
cgcggcgtcgacctgcaggtgaacgccggcgaaatggtcgcgctgctcggcagcaacggc
gcgggcaagtccaccctcaacaagatggtctgcggcctgtgccccgcctggagcggcagt
gtgcgcttcgacggcaaggacctgagtggcgcgcactaccgcgacgtggtgaaggccggc
ctgatccaggtgcccgagggccgcaaggtgtttcccaacctcagcgtgctggagaacctg
gagctcggctccttcacgcgggcgcgcgagcgccgcgcggccaacgtcgagaagatgttc
cacatcttcccgcggctcagggaacgcatggcgcagcacgccggcaccatgagcggcggc
gagcagcagatgctggccatcgcgcgcgggctcatggccgagcccgtgctgctgatcctc
gacgagccctcgctcgggctttcgccgcggctggtggaagagatgttcacgctgatccgc
gaactgcgcgacggcggcctcgcggtgctgctggtggagcagaacgtgggccagtcgctc
gagatcgccgaccgcgcctacgtgctggagaacggcagcgttcgcttttcgggcctgccc
ggcgaactgctcggcagcgacgaactgcggcgtgcctacctggggctctga
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