Variovorax paradoxus B4: VAPA_1c08810
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Entry
VAPA_1c08810 CDS
T02835
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c08810
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c08810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c08810
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AGU48001
UniProt:
T1X6A9
LinkDB
All DBs
Position
1:973128..974234
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AA seq
368 aa
AA seq
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MRPLRIGIIGSWSGPYAAGGRQFDAGMSVWLAAHSQRIAGRPVELLRRDVPGSAPEQARR
QAQDLVEGERVDLLAGLDFSSNAYAVGAVATQAKVPLLVMNAASSGITARCPFAVRVSFT
IAQVTMPLARWAIQQGLRDVCTVVADYASGVDAESAFVSAITAGGGRIGAMLRVPLNTLD
YSAYMLRLRQLRPQAVFFFLPSGQMPATFLKFWRDRGMADTGIRLLATGDATDDHYLEGI
GELADGLVTSHHYSFAHESAANRRFTGVFETEYGSHLRPGYFAVAAHDALAAADAAMSSP
AARGGASAEQLVNAFRGLRLESPRGPIEIDAHTRDIVQAVYIRRTERLDGRWINREFERF
ERVRDPAL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgcggccgctgcgcatcggcatcatcggttcctggtccggcccctatgccgccggtggg
cggcagttcgatgccggcatgtcggtctggcttgccgcccacagccagcgcatcgcgggg
cgcccggtcgagctgctgcgccgcgacgtgcccggcagcgcgcccgagcaggcgcgccgc
caggcccaggacctggtggagggcgagcgcgtggacctgctcgcggggctggacttcagc
tccaacgcctatgccgtgggcgccgtggccacgcaggccaaggtgcctctcctggtgatg
aatgcggcttcctcgggcatcacggcgcgctgcccgttcgcggtgcgggtgtccttcacc
atcgcgcaggtcacgatgccgctggcgcgctgggcgatccagcaaggactgcgcgatgtc
tgcacggtggtggccgactacgcctcgggcgtcgatgccgaaagcgctttcgtctcggcc
atcaccgcaggcggtggccgcatcggcgcgatgctgcgcgtgccgctcaatacgctggac
tattcggcctacatgctgcggctgcgccagctcaggccgcaggcggtgttcttcttcctg
ccttcgggccagatgccggcgaccttcctcaagttctggcgcgaccgcggcatggccgac
accggcatccgcctgctcgcgaccggcgacgccaccgacgaccactacctcgaaggcatc
ggcgagctggccgatggcctggtgaccagccaccactactcgtttgcccacgagtcggcg
gccaaccgccgcttcaccggcgtcttcgagaccgagtacggcagccatctgcggcccggc
tatttcgcggtggcggcgcacgatgcgctcgcggccgccgacgccgcgatgagttcgccg
gccgcgcgcggcggcgcgagcgcagaacagctggtgaatgctttccggggcctccggctc
gagagtccgcgcggcccgatcgagatcgacgcccacacccgggacatcgtgcaggccgtc
tacatccgccgcaccgaaaggctcgacgggcgctggatcaaccgcgagttcgaacgcttc
gagcgggtgcgcgacccggcgctgtga
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