Variovorax paradoxus B4: VAPA_1c08860
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Entry
VAPA_1c08860 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c08860
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_1c08860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AGU48006
UniProt:
T1X6B3
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All DBs
Position
1:979061..980047
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AA seq
328 aa
AA seq
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METKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPA
GQTLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEIAVPHTLAFTFFPSWVTSLREHFGPI
KSRLIALNVHDAVLRLVEGSCDLLIAYHHPSQPLQLDANKYEMVSLGEETVAPWVKADAD
GAPRFRLPGRPGQPLPYLGYAPGAYLGRVVDQLLKESGTAIHLDRVYETDMAEGLKVMAL
EGHGIAFLPQSAVRKEIKARKLVSALPPEIDSLEATMEIRAYRERPGAPAPVKTGTGRAA
KAAASEGLQPKRTADALWSYLVGAQPGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaagtggctagaagacttcatcagtttggcggagacccgcagcttcagccgc
tcggcccagttgaggcacgtgacccagcccgcgttttcccgccgcatccaggcgctcgaa
ggctgggccggcaccgacctggtcgaccgcagctcctaccccacgcgcctcacgcccgcg
ggccagacgctctacagccaggccatcgagatgctgcaatcgctgcagagcacccgcgcc
atgctgcgcggccattcggccgccgggcaggacgtgatcgagatcgcggtgccgcatacg
ctggccttcaccttctttccctcctgggtgaccagcctgcgcgaacacttcggccccatc
aagagccggctcatcgcgctcaacgtgcatgacgccgtgctgcgcctggtcgagggcagc
tgcgacctgctgatcgcctaccaccatccttcccagccgctgcagctcgacgccaacaag
tacgagatggtcagcctgggcgaggaaacggtggcgccctgggtcaaggccgacgccgac
ggcgcgccgcgtttccggctgcccggccggccgggccagccgctgccgtacctgggctac
gcgccaggtgcctacctggggcgggtggtcgaccagctgctgaaggagtcgggcaccgcc
atccacctcgaccgggtctatgaaaccgacatggccgaaggcctgaaggtcatggcgctc
gaaggccacggcatcgcctttctgccgcagagcgcggtgcgcaaggagatcaaggcgcgc
aagctcgtgagcgcgctgccgcccgagatcgacagcctggaggcgacgatggagatccgc
gcctaccgcgagcggcccggcgcgcccgcgccggtgaagaccggcacaggccgcgccgcg
aaggctgcggcctccgagggcctgcagcccaagcgcaccgctgatgcgctgtggtcgtat
ctggtcggcgcccagcccggccgctga
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