Variovorax paradoxus B4: VAPA_1c09280
Help
Entry
VAPA_1c09280 CDS
T02835
Name
(GenBank) transcriptional regulator, MarR family
KO
K06075
MarR family transcriptional regulator, transcriptional regulator for hemolysin
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c09280
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
MarR family
VAPA_1c09280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MarR_2
MarR
HTH_27
WHD_ArnR1
HVO_A0261_N
HTH_IclR
HTH_20
TrmB
Fe_dep_repress
Rubella_E2
DUF3860-like
HTH_Crp_2
HTH_24
PadR
HxlR
HTH_34
WHD_F93
Motif
Other DBs
NCBI-ProteinID:
AGU48048
LinkDB
All DBs
Position
1:1025118..1025597
Genome browser
AA seq
159 aa
AA seq
DB search
MSHISKTREAALMSLGTALSPLQRGYRAAADKAVAHVGLSQSLAWPIVVIGRMHGGVRQG
VLAEALGIEGPSLVRSIDQLVEAGFVERREDPADRRAKTLHLTPAGEAACQPIEAALRGL
RATLFDGVPDDDIAACLRVFAVLGERLGRAAPAPQEGRR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacatctcgaagacgcgcgaagccgcgctgatgtcgctcggcacggcgctctcg
ccgctgcagcgcggctatcgggccgcggccgacaaggcggtggcgcacgtgggcctttcg
cagtcgctggcgtggccgatcgtggtgatcggccgcatgcacggcggggtgcgccagggc
gtgctcgccgaggcgctgggcatcgaggggccttcgctggtgcgctcgatcgaccagctg
gtggaggcgggcttcgtcgagcgccgcgaagacccggccgaccgccgggccaagacgctg
catctcacgccggccggcgaggccgcctgccagcccatcgaggccgcgctgcgcggcttg
cgcgccacgctgttcgacggcgtgccggacgacgacattgccgcctgcctgcgcgtgttc
gcggtgctgggagagcggctcggccgcgccgcgccggcgccgcaggaagggcgcaggtag
DBGET
integrated database retrieval system
